Gene Information

Name : Mycch_2786 (Mycch_2786)
Accession : YP_006453226.1
Strain : Mycobacterium chubuense NBB4
Genome accession: NC_018027
Putative virulence/resistance : Unknown
Product : malate synthase
Function : -
COG functional category : -
COG ID : -
EC number : 2.3.3.9
Position : 2910021 - 2912213 bp
Length : 2193 bp
Strand : -
Note : PFAM: Malate synthase; TIGRFAM: malate synthase G

DNA sequence :
ATGACCGATCGCGTGACGGTGGGTAACCTGCGCGTCGCCCCCGTGTTGTACGACTTCATCAACAACGAGGCGTTGCCGGG
CACCGACATCGACGCCGACAGCTTCTGGTCCGGTGTCGACAAGGTCGTCGCCGACCTCACCCCGGCCAATCAGGACCTGC
TGGCCCGCCGCGACGACCTGCAGGCGCAGATCGACCGGTGGCACCGCGCCCGGGTCATCGGCGGCTTCGAAGGCGAGGAC
TACCGGCAGTTCCTCACCGACATCGGCTACCTGCAGCCGGAACCGGACGACTTCACCATCACCACCGCGGGCGTCGACGA
CGAGATCACCACGACCGCGGGCCCGCAGCTGGTGGTGCCGATCCTCAACGCCCGCTTCGCGCTCAACGCCGCCAACGCGC
GGTGGGGTTCGCTCTACGACGCGCTCTACGGCACCGACGTCATCTCCGACGAGGGCGGCGCAGAAGCCGGCAGCAGCTAC
AACAAGATCCGCGGCGACAAGGTCATCGCCTACGCGCGGCGCTTCCTCGACAGCGCCGTCCCGCTGGCCTCGGGATCCTG
GGCCGACATCACCGGCCTGAAGATCGACGACGGTCAACTCACCGCGACCCTGGACGACGGTGGCTCGGCCGGGCTGAAGA
ACAACGAGCAGCTCGTCGGGTACCTCGGTGAGGCCGACGCGCCGACCAGCGTGCTGCTGGCCAACCACGGGCTGCACATC
GAGATCCTCGTCGACGCCGAATCGCCGATCGGTTCGACCGACAAGGCCGGCATCAAGGACGTGGTGCTCGAGTCCGCGAT
CACCACGATCATGGACTTCGAGGACTCGGTCGCGGCCGTCGACGCCGACGACAAGGTGCTCGGCTACCGCAACTGGCTCG
GTCTGAACCGTGGCGACCTGCAAGAAGAGGTCACCAAAAACGACAAGACGTTCACCCGCGTCCTCAACGAGGACCGCACC
TACACCGCCCCCGACGGCGAGACCGAGGTCACCCTCCCTGGCCGCAGCCTGCTGTTCGTGCGCAACGTCGGCCACCTGAT
GACCAACGACGCCATCACCGACGCCGAAGGCGCAGAGGTGCCCGAGGGCATCCAGGACGCGCTGTTCACCAGCCTCATCG
CGATCCACGGGCTGAAGGCGAACGACGGCAACGGCCCGCTGGTCAACAGCCGCACCGGCTCGATCTACATCGTCAAGCCC
AAGATGCACGGCCCCGACGAGGTCGCGTTCACCTGCGAGCTGTTCAGCCGCGTCGAGGATGTGCTCGGCCTGCCGCAGAA
CACCATCAAGGTCGGCATCATGGACGAGGAGCGCCGCACCACGCTGAACCTGAAGGCGTGTATCAAAGCCGCCGCGGACC
GCGTCGTGTTCATCAACACCGGCTTCCTGGACCGCACCGGCGACGAGATCCACACGTCGATGGAAGCCGGCCCGATGATC
CGCAAGGGTGCGATGAAGTCCACCGACTGGATCAAGGCCTACGAGGACCAGAACGTCGATATCGGCCTCGAGACCGGCAT
GTCCGGCAAGGCGCAGATCGGCAAGGGCATGTGGGCGATGACCGAGCTGATGGCCGACATGGTCGACCAGAAGATCGGCC
AGCCCAAGGCGGGTGCGACCACCGCGTGGGTGCCCTCGCCGACGGCGGCGACGCTGCACGCCATGCACTACCACGAGGTG
GATGTCTTCGCGGTGCAGGAGGAGCTGGCCGGCAAGCGGCGCGCGACGGTCGAGGCCCTGCTGACCATCCCGTTGGCCAA
GGAGCTGGCGTGGGCGCCGGAGGAGATCCGCGAGGAGGTCGACAACAACTGCCAGTCGATCCTCGGCTACGTGGTGCGCT
GGATCGACGCCGGCGTGGGTTGTTCGAAGGTCCCCGACATCCACGACGTGGCGCTGATGGAGGACCGTGCGACGCTGCGC
ATCTCCAGCCAGCTGCTGGCCAACTGGCTGCGCCACGGCGTGATCACCGAAGAGGACGTCAAGGCCAGCCTGCGCCGGAT
GGCGGCCGTGGTCGACGAGCAGAACGCCGCGGACCCCGACTTCCGGCCGATGGCACCCGACCCGGAGGGCAGCATCGCCT
TCCAGGCCGCACAGGAACTGATCCTCGCCGGCGGCGCGCAGCCCAGCGGCTACACCGAGCCGATCCTGCACCGGCGCCGC
CGGGAGTTCAAGGCAGCGAACAACGTTGGCTGA

Protein sequence :
MTDRVTVGNLRVAPVLYDFINNEALPGTDIDADSFWSGVDKVVADLTPANQDLLARRDDLQAQIDRWHRARVIGGFEGED
YRQFLTDIGYLQPEPDDFTITTAGVDDEITTTAGPQLVVPILNARFALNAANARWGSLYDALYGTDVISDEGGAEAGSSY
NKIRGDKVIAYARRFLDSAVPLASGSWADITGLKIDDGQLTATLDDGGSAGLKNNEQLVGYLGEADAPTSVLLANHGLHI
EILVDAESPIGSTDKAGIKDVVLESAITTIMDFEDSVAAVDADDKVLGYRNWLGLNRGDLQEEVTKNDKTFTRVLNEDRT
YTAPDGETEVTLPGRSLLFVRNVGHLMTNDAITDAEGAEVPEGIQDALFTSLIAIHGLKANDGNGPLVNSRTGSIYIVKP
KMHGPDEVAFTCELFSRVEDVLGLPQNTIKVGIMDEERRTTLNLKACIKAAADRVVFINTGFLDRTGDEIHTSMEAGPMI
RKGAMKSTDWIKAYEDQNVDIGLETGMSGKAQIGKGMWAMTELMADMVDQKIGQPKAGATTAWVPSPTAATLHAMHYHEV
DVFAVQEELAGKRRATVEALLTIPLAKELAWAPEEIREEVDNNCQSILGYVVRWIDAGVGCSKVPDIHDVALMEDRATLR
ISSQLLANWLRHGVITEEDVKASLRRMAAVVDEQNAADPDFRPMAPDPEGSIAFQAAQELILAGGAQPSGYTEPILHRRR
REFKAANNVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 58