Gene Information

Name : Mycch_4893 (Mycch_4893)
Accession : YP_006455265.1
Strain : Mycobacterium chubuense NBB4
Genome accession: NC_018027
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5138010 - 5138291 bp
Length : 282 bp
Strand : +
Note : PFAM: BMC domain

DNA sequence :

ATGGCCAGCAACGCAATCGGAATGATCGAGACCAAGGGTTTCGTGGCGGCACTGGCGGCCGCCGACGCAATGGTCAAGGC
CGCCAACGTCACCATCACCGACCGGCAGCAGGTCGGCGACGGTCTGGTGGCCGTCATCGTCACCGGCGAGGTGGGCGCCG
TCAAGGCCGCCACCGAGGCGGGTGCCGAATCCGCTTCGCAGGTGGGCGAACTGGTCAGCGTCCACGTCATCCCGCGGCCG
CACAGCGAGCTCGGCGCGCACTTCGCCGTCAACGGCCAGTAG

Protein sequence :

MASNAIGMIETKGFVAALAAADAMVKAANVTITDRQQVGDGLVAVIVTGEVGAVKAATEAGAESASQVGELVSVHVIPRP
HSELGAHFAVNGQ

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	CAD42079.1	hypothetical protein	Not tested	PAI II 536	Protein	8e-11	54
unnamed	CAD42077.1	hypothetical protein	Not tested	PAI II 536	Protein	3e-10	54
unnamed	CAD42078.1	hypothetical protein	Not tested	PAI II 536	Protein	5e-11	50

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Mycch_4893	YP_006455265.1	carbon dioxide concentrating mechanism/carboxysome shell protein	VFG1598	Protein	3e-11	54
Mycch_4893	YP_006455265.1	carbon dioxide concentrating mechanism/carboxysome shell protein	VFG1596	Protein	1e-10	54
Mycch_4893	YP_006455265.1	carbon dioxide concentrating mechanism/carboxysome shell protein	VFG1597	Protein	2e-11	50