Gene Information

Name : A458_21385 (A458_21385)
Accession : YP_006459913.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-70 factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4617803 - 4618318 bp
Length : 516 bp
Strand : -
Note : COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

DNA sequence : 
ATGGCAATTGAAGGTATGGTTCGACAGCAGATGCTGCATCGGCTCTATGCCGAGCATCACGGCTGGCTTAACGGCTGGCT
GCGGCGTCAGCTGGGCTGTAATCAGCGGGCGGCCGACCTCGCACAGGACACCTTCGTGCGGGTGATGACCAAGGATCAGG
ACATGGGCGCCATCCGCGAACCCAGAGCCTACCTGCATACCATCGCCAAGGGCCTGTTGATCAACCATTGGCGGCGCCGA
CAGATCGAGCAGGCCTATCTTGATGCGCTGGCACTGCAACCCGAGCCCGTGGCGCCATCGCCGGAATCCCAGGCGTTGAT
CGTCGAAACCTTGCTGCAGGTCGACGCCATGCTGGCCCAGCTGCCGGCGAAGGTGCGCAGCGCCTTTCTCATGTCGCAGC
TGCAGGGCATGACCTACGCCGCAATCGCCATCGAACTCGGCGTTTCCGAGCGGATGGTGAAGAAGTACATGGCTCAGGCC
ATGTTGCATTGCCTGCTGCTGGTGGCGGAGGACTGA

Protein sequence : 
MAIEGMVRQQMLHRLYAEHHGWLNGWLRRQLGCNQRAADLAQDTFVRVMTKDQDMGAIREPRAYLHTIAKGLLINHWRRR
QIEQAYLDALALQPEPVAPSPESQALIVETLLQVDAMLAQLPAKVRSAFLMSQLQGMTYAAIAIELGVSERMVKKYMAQA
MLHCLLLVAED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 3e-36 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_21385 YP_006459913.1 ECF subfamily RNA polymerase sigma-70 factor VFG1049 Protein 1e-36 52