Gene Information

Name : Desaci_4601 (Desaci_4601)
Accession : YP_006468770.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Unknown
Product : transketolase, alpha subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4811835 - 4812773 bp
Length : 939 bp
Strand : -
Note : PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase

DNA sequence : 
TTGGCGAATAAAGTTGCAACGCGAGATGCTTATGGCAAAGCTCTTCTGACGTTAGGGAAGGAAAACCCTAATGTAGTTGT
TTTAGATGCTGATTTATCAAAGTCGACGAAAACAGCCGAATTTGGCAAGAATTATCCTGAACGTTTCTTTAATATGGGTA
TAGCTGAAGCGAACCTCTTAGGAACTGCGGCTGGGCTGGCAGTTGGCGGAAAAATCCCCTTTGCAAGCAGTTTTGCCATT
TTTGCAACCGGGCGGGCCTTTGAGCAAATTCGCAATTCCATTGCCTATCCAAAATTAAATGTGAAGATTGCGGCAACCCA
TGCAGGAATTTCCGTCGGAGAAGACGGCGGTTCTCATCAGGCCATAGAAGATGTCGCTATCATGCGGGCCCTCCCTAATA
TGACGGTTTTGGTCCCTGCTGACGGAGAAGAAACCCGCCAGATGGTCTTAGCAGCTGCTGATTACAAGGGTCCCGTTTAT
ATCCGGATGGGAAGATTAGAAGTGCCTGTGATTTTTGATGAAAACTACCATTTTGAAATTGGCAAGGCTAAGGTTCTTAA
AGAGGGAAGCGATGCTGCTATTATGGCTAATGGCTTAATGGTGGCCTGCGCCCTGGAAGCTGCCGAGCTGCTGGCAGCAG
AAGGAATTAACGTCAGCGTAGTTAATGTTTCTTCAGTAAAACCTATTGATGAAGAAACCATCCTGCGGGTTGCCAAGGAG
ACAAGAGCCGTCGTCACCGCCGAAGAACACAATATTATCGGGGGCTTGGGCAGCGCCGTTGCGGAAATACTGGGAGAAAA
GCTGCCGACACCCATGGTACGTGTTGGGCTTAAGGATACCTTTGGCGAATCCGGACGTCCTTATGAACTTCTTGAAAAAT
ATGGTCTAACGAAAGAAGACCTCGTTAAAGCCGTTCGCGAAGTGCTGTCCAAAAAGTAA

Protein sequence : 
MANKVATRDAYGKALLTLGKENPNVVVLDADLSKSTKTAEFGKNYPERFFNMGIAEANLLGTAAGLAVGGKIPFASSFAI
FATGRAFEQIRNSIAYPKLNVKIAATHAGISVGEDGGSHQAIEDVAIMRALPNMTVLVPADGEETRQMVLAAADYKGPVY
IRMGRLEVPVIFDENYHFEIGKAKVLKEGSDAAIMANGLMVACALEAAELLAAEGINVSVVNVSSVKPIDEETILRVAKE
TRAVVTAEEHNIIGGLGSAVAEILGEKLPTPMVRVGLKDTFGESGRPYELLEKYGLTKEDLVKAVREVLSKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 7e-40 50
unnamed AAT96101.1 transketolase Not tested T-PAI Protein 9e-44 46
unnamed AAT96057.1 transketolase Not tested T-PAI Protein 9e-44 46