Gene Information

Name : Desaci_4602 (Desaci_4602)
Accession : YP_006468771.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Unknown
Product : transketolase, beta subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4812763 - 4813596 bp
Length : 834 bp
Strand : -
Note : PFAM: Transketolase, thiamine diphosphate binding domain

DNA sequence : 
TTGACCACTGTTGAATTAAAACGGAAAGCGAATCTCATTCGTCAAGACATTATTTCTATGCTGGTACCTGCAAAATCAGG
CCATCCCGGGGGAAGCCTATCGGCAGCCGATATTGTGGCAACTCTCTATTTCCAAGAAATGAGAATAAATCCACAAGAAC
CCAATTGGGCCGATCGAGACCGTTTTGTTTTATCCAAAGGTCATGCGGCACCGGTTCTCTATGCAGCGCTTGCTGAAAAA
GGGTATTTCCCCAAGGAGGAACTTCAAGGGCTGCGCCAAACGGGGCGTATGCTGCAGGGACATCCGGATATGAAAAAGAC
TCCCGGAGTCGATATGTCCTCAGGTTCCTTAGGGCAGGGTCTTTCCGTAGCCAATGGCATCGCTTTAGCAGGAAAGCTTG
AGAAGAAAGACTATCATGTTTATGCGCTGCTTGGTGACGGAGAAATGGCTGAAGGACAGATTTGGGAAGCAGCAATGGCT
GCTGCACATTATAAGCTGGATAATCTTACGGCCATTTTAGACTTTAACGGTTTGCAGATTGACGGAACGACGGATAGTGT
CATGTCAACCGCACCACTAACCGATAAGTGGCGTGCTTTTTGCTGGAATGTCATTGAAGTTGACGGCCATGATATTGAGG
CCCTGCAAAAGGCCTTTGCCGAAGCCAAACAAGTTAAAGGAAAACCAACGATTCTCATTGCCAAAACTGTGAAAGGCAAG
GGTGTTTCCTTTATGGAAGATCAAGCCGGTTGGCATGGCAATGCACCGAATGCTGAGCAAGCTGAACAGGCCCTCAAAGA
ATTACGAGAGGAGGGTTTATCCCTTGGCGAATAA

Protein sequence : 
MTTVELKRKANLIRQDIISMLVPAKSGHPGGSLSAADIVATLYFQEMRINPQEPNWADRDRFVLSKGHAAPVLYAALAEK
GYFPKEELQGLRQTGRMLQGHPDMKKTPGVDMSSGSLGQGLSVANGIALAGKLEKKDYHVYALLGDGEMAEGQIWEAAMA
AAHYKLDNLTAILDFNGLQIDGTTDSVMSTAPLTDKWRAFCWNVIEVDGHDIEALQKAFAEAKQVKGKPTILIAKTVKGK
GVSFMEDQAGWHGNAPNAEQAEQALKELREEGLSLGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96117.1 transketolase Not tested T-PAI Protein 4e-43 43
unnamed AAT96056.1 transketolase Not tested T-PAI Protein 1e-43 43
unnamed AAT96177.1 transketolase Not tested T-PAI Protein 9e-43 43
unnamed AAT96229.1 transketolase Not tested T-PAI Protein 5e-43 43
unnamed AAT96100.1 transketolase Not tested T-PAI Protein 9e-43 42