Gene Information

Name : Desaci_0573 (Desaci_0573)
Accession : YP_006464969.1
Strain : Desulfosporosinus acidiphilus SJ4
Genome accession: NC_018068
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 574543 - 575211 bp
Length : 669 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGATTGAAATTATAGCGGCTAAAGGAGTAGGCAAAACTTTTGGTAACCTCGATGTGGTGCGTCACGTCGATTTTAAGCT
CCAAAGCGGTCAGTTTGTTGCCCTCCTAGGTCCTTCCGGTTCCGGCAAGAGTACCTTTATAGCCATGTTGAGTGGCTTGG
AAAGACCATCATCCGGCGAAATATCCGTCGCTGGACGTAGTTTAACATCCTTAAGTGAGGATGATCTGTCCCTAATGCGT
CGTGAGAAAATCGGTATAGTCTTTCAGTTTTTTAATTTAATTCCTACCTTGAATGCTCTGGAAAATGCGGCTTTTCCTCT
TTTTCCGGTAACTCTGCCTGACAAAGAAAAGAGGCAAAAGGCTGCGAAAGCGTTAGAGTTGGTTGGCATGTCCCATCGTG
CAACTCACCGCCCAGGTGAAATGAGCGGTGGAGAAAGGCAACGCATAGCCATTGCCAGAGCGTTGGTTAACGACCCCGTG
ATTATTCTGGCCGATGAACCGACCGGCAATCTCGATTCCACGACCGGGCAGGAGATTGTCAATCTTTTGGCTTCTTTAAG
CCGAGCCCGCGGTACAGCCCTATTGGTAGCTACCCACGATGATAAATTAGCTAAGGCAGCAGAGCAAGTTATTTATATGA
AAGATGGTGAGTTAGTTGAACAAACATAA

Protein sequence : 
MIEIIAAKGVGKTFGNLDVVRHVDFKLQSGQFVALLGPSGSGKSTFIAMLSGLERPSSGEISVAGRSLTSLSEDDLSLMR
REKIGIVFQFFNLIPTLNALENAAFPLFPVTLPDKEKRQKAAKALELVGMSHRATHRPGEMSGGERQRIAIARALVNDPV
IILADEPTGNLDSTTGQEIVNLLASLSRARGTALLVATHDDKLAKAAEQVIYMKDGELVEQT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desaci_0573 YP_006464969.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 4e-38 45
Desaci_0573 YP_006464969.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 3e-36 41