Gene Information

Name : SCIM_0466 (SCIM_0466)
Accession : YP_006469368.1
Strain : Streptococcus intermedius JTH08
Genome accession: NC_018073
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 531615 - 532382 bp
Length : 768 bp
Strand : +
Note : -

DNA sequence : 
ATGACATTATTGGATGTACAACATGTAAAGAAAATTTATAAAACACGCTTTCAAGGAAATCAAGTGGAAGCACTGAAGGA
TATTCATTTTACAGTAGATGAGGGTGATTATGTAGCGATTATGGGTGAGTCTGGGTCTGGAAAATCTACCTTACTCAACA
TTCTAGCCATGCTGGATAAGCCAACTGAAGGACGTGTCTTTCTCAACGGTACTGATACAGCGACGATTAAAAACAGTCAA
GCTTCTAGCTTCCGTCGGGAGAAATTAGGTTTCGTCTTTCAAGATTTTAACTTGTTAGACACACTGTCAGTCAAGGACAA
TATTCTCTTGCCACTCGTCCTATCGCGCCGTCCCATCACGGAAATGATGCAAAAGCTGGTCACAATTTGTAACGAATTGG
GAATTAACCAACTGCAAGAAAAATTTCCCTATGAAATCTCAGGTGGTCAAAAACAACGGGTGGCAGTAGCACGTGCTATT
ATCAGTAATCCAGAAATTCTGTTAGCAGATGAACCAACTGGAGCGTTGGATTCTAAGTCTTCTGCGGCGCTTTTAGATGT
CTTTGATGACATCAATGACCGCGGACAGACGATTCTTATGGTAACACATTCGACTTCGGCGGCAAGTCGTGCTAAGCGCG
TACTGTTCATCAAGGATGGTATTTTGTATAACCAAATTTTCCGAGGCGATAAGACGGAGCGGCAGATGTTCCAAGAGATT
TCTGATACCTTAACGATCATGGCAAGCGAGGTGAATCAAGGTGCTTAG

Protein sequence : 
MTLLDVQHVKKIYKTRFQGNQVEALKDIHFTVDEGDYVAIMGESGSGKSTLLNILAMLDKPTEGRVFLNGTDTATIKNSQ
ASSFRREKLGFVFQDFNLLDTLSVKDNILLPLVLSRRPITEMMQKLVTICNELGINQLQEKFPYEISGGQKQRVAVARAI
ISNPEILLADEPTGALDSKSSAALLDVFDDINDRGQTILMVTHSTSAASRAKRVLFIKDGILYNQIFRGDKTERQMFQEI
SDTLTIMASEVNQGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCIM_0466 YP_006469368.1 ABC-type antimicrobial peptide transport system ATPase component CP001581.1.gene798.p Protein 2e-42 45
SCIM_0466 YP_006469368.1 ABC-type antimicrobial peptide transport system ATPase component NC_012469.1.7686878. Protein 6e-40 44