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Name : lysS (SCIM_0578) Accession : YP_006469480.1 Strain : Streptococcus intermedius JTH08 Genome accession: NC_018073 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 668878 - 670365 bp Length : 1488 bp Strand : - Note : - DNA sequence : ATGACTACTGAACATATTGAAGAATTAAATGACCAGCAACTGATTCGTCGTGAAAAAATGACCGCTTTAGCAGAACAAGG TATTGACCCTTTTGGTAAACGTTTTGAACGTACTGCAGATTCTGCCCAATTAAAAGAAAAATATAGTGATAAAACAAAAG AAGAACTACATGAATTAGCGGAAACTGCTACCATTGCGGGACGGCTTATGACCAAGCGCGGGAAAGGCAAAGTCGGTTTT GCTCATATCCAAGACCGTGAAGGTCAAATTCAAATCTATGTCAGAAAAGATACTGTTGGTGAAGAAAATTATCAAATTTT CAAAAAAGCAGATATTGGGGACTTCCTTGGTATTGAAGGTGAGGTTATGCGCACAGATATGGGAGAGTTGTCAATCAAAG CAACTCACATCACACACCTCTCTAAAGCACTTCGTCCATTACCAGAAAAATTCCATGGACTAACAGACGTTGAAACGATT TATCGTAAGCGTTATTTGGATTTAATTTCCAATCGGGAAAGCTTTGAACGCTTCGTAACTCGCAGTCGTATCGTTTCAGA AATTCGCCGTTATCTTGATAACCAAGGATTCCTTGAAGTTGAAACACCTGTACTACATAATGAAGCTGGTGGTGCTGCTG CTCGTCCATTTATTACTCATCACAATGCACAAAATATTGATATGGTGCTTCGTATCGCGACTGAATTGCACTTAAAACGT CTAATTGTTGGTGGTATGGAACGTGTTTATGAAATGGGACGCATTTTCCGTAACGAAGGAATGGATGCCACTCACAATCC TGAATTTACTACAATTGAAGCTTATCAGGCTTATGCGGATTTTGAGGATATCATGGACTTGACAGAAGGGATTATCCAAA GTGCAGCTAAAGCTGTTACAGATGCCGAAAGTGTCCCTTATCAAGGTACTGAAATCTTTATCGGTCGCAAGTTTGCACGT AAACATATGCTAGAAGCCATTAAAGAGCAGACGGGTATTGATTTCTGGAAAGAAATGACTCTCGAAGAGGCTACTGCACT AGCTAAGGAACATCATGTAACGGTTGAAAAGCATTTTACAGTTGGTCATATTATCAATGCTTTCTTTGAAGACTTTGTTG AAGATACCTTAATTCAGCCTACATTTATCTATGGGCATCCAGTTGAAGTTTCACCTCTTGCTAAGAAAAATGCAGATGAC CCACGCTTTACAGACCGCTTTGAGCTCTTTATCGTTGGACGCGAATTTGCCAACGCCTTTACAGAGTTGAACGACCCAAT TGACCAATTATCGCGTTTTGAAGCGCAAGCCAAAGCTAAGGAACTCGGAGATGACGAAGCAACTGGCATTGACTACGATT ACGTAGAAGCTCTTGAATACGGCATGCCACCAACTGGAGGCCTCGGAATTGGAATTGACCGCTTAATTATGCTGTTGACA GATGTCACTTCTATTCGTGACGTATTGCTTTTCCCTACAATGAAGTAA Protein sequence : MTTEHIEELNDQQLIRREKMTALAEQGIDPFGKRFERTADSAQLKEKYSDKTKEELHELAETATIAGRLMTKRGKGKVGF AHIQDREGQIQIYVRKDTVGEENYQIFKKADIGDFLGIEGEVMRTDMGELSIKATHITHLSKALRPLPEKFHGLTDVETI YRKRYLDLISNRESFERFVTRSRIVSEIRRYLDNQGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKR LIVGGMERVYEMGRIFRNEGMDATHNPEFTTIEAYQAYADFEDIMDLTEGIIQSAAKAVTDAESVPYQGTEIFIGRKFAR KHMLEAIKEQTGIDFWKEMTLEEATALAKEHHVTVEKHFTVGHIINAFFEDFVEDTLIQPTFIYGHPVEVSPLAKKNADD PRFTDRFELFIVGREFANAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLIMLLT DVTSIRDVLLFPTMK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 8e-112 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006469480.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 4e-112 | 48 |
