Gene Information

Name : SCIM_0644 (SCIM_0644)
Accession : YP_006469546.1
Strain : Streptococcus intermedius JTH08
Genome accession: NC_018073
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 748080 - 749732 bp
Length : 1653 bp
Strand : +
Note : -

DNA sequence :
ATGACGACTATTGATGTAGATCTTTGTTCGATACAGGAAGCGCGTGACTTAGTTAGAAATGGAAAAGCTGCAGCTGATAA
GATAGCTTTCTATTCTGATGAACAAATTGATTTAATTTTAAAGAATATAGTGAAGACGATAGAGGCCAATGCTTACTATT
TAGCTGACTTAGCAGTGGAAGAGACGGGCTTTGGAAAACTTAATGATAAAGCATATAAGAATTACGCTGCTTCAACTCTG
CTCTATAGTGAGATGAGACAGTATAAGACATCAGGCGTGTTAAGTTTTGATGAATCCAAAAAAGTATTTAAAGTAGCTGA
GCCAATGGGGTTGCTTCTTGGGATTACTCCGTCGACCAATCCGACTTCAACAATTATTTTTAAATCGCTTATTGCTATTA
AATCTCGGAATGCAATTGTCTTTGCTCCACATCCATCTGCAAAACGATGTAGTTACGCTGCTGCCGAATTAGTATTAAAA
GCGGCCGTGGAAGCAGGGGCACCTGAACATATCATCGGTTGTGTGAAGAATCCTACAATGGAAGCAACAAACGAACTCAT
GAAATCGAAGGATATTGCCCTGATTATTGCCACAGGAGGTCCAGGAATGGTTCGGTCAGCCTACAGTAGTGGGAAGCCTG
CTATTGGTGTAGGAGCGGGTAATTCACCTGTGTATATCGAACGAACGGCCGATGTGAAAAAAGCAATTTCTACAATTATC
GCTTCGAAAACATTTGATAATGGAACCATTTGTGCATCTGAACAATCTTTGATTTGTGAAGAGGTCAATAAAGATGCTGT
CGTTTCAGAATTGATTGCACAAGGATGTTATATGATGACGAAGGAGGAAACAGACAGGGTTTGCTCATTACTCTTCCGAG
GTATTTTAGATGGTCATCCAGTGATGAATGCAAAATTTGTCGGACAAGCTGCAACTACTATAGCAGAAGCAGCAGGTATT
CGTGTACCAGTTGATACGAAACTATTAATTGGCTCTCAATCAGGCGTTGGAGAAGGAAATCCACTTTCCTTTGAAAAATT
GACAACTGTATTAGGATTCTATGTGGTGAAAAATTGGGAAGAAGCTTGTGCATTAAGTATTCGTTTGCTCCAAAATGGTA
TAGGACATACAATGAGTTTGCACACAAGTGATCCAGATATTATCTTTAAATTTTCAAGCAAACCAGCTTCACGTATCCTA
ATTAATACAGGGGGGAGCCAAGGAGGAACGGGTGTTTCTACAGGATTACCGATAGCCTTTACTTTAGGATGTGGAACGGA
TGGAGGAAGTTCAGTATCAGATAACCTGACTCCGGAACATTTGATAAATGTGAAAACAGTGGCTTATGGCATTAAGGATG
TGACGAAATTAGTTGCAGAGGATGATTATTTCCATACCTTACCAAAAGTAGCTGTATGCAATCGTCCAAATGAGAAGGTG
GACGGTCTGAGCTCAGCGTCACTAAAAGTGAAACAAGAAATCGTTACGAAAAAAGATTTTCTAAATCAGACCCCTCAGCA
AATTCAAGTAAATTTTGAGAAAAACAATCCACCAAGTTCTCATGAAGTACCTTCCAATGCTACAGTTACATCAGATGATG
AAACGAACGAAGCTATTGTAAGGGAGATTTTATCAACATTAAAAATAAAATAG

Protein sequence :
MTTIDVDLCSIQEARDLVRNGKAAADKIAFYSDEQIDLILKNIVKTIEANAYYLADLAVEETGFGKLNDKAYKNYAASTL
LYSEMRQYKTSGVLSFDESKKVFKVAEPMGLLLGITPSTNPTSTIIFKSLIAIKSRNAIVFAPHPSAKRCSYAAAELVLK
AAVEAGAPEHIIGCVKNPTMEATNELMKSKDIALIIATGGPGMVRSAYSSGKPAIGVGAGNSPVYIERTADVKKAISTII
ASKTFDNGTICASEQSLICEEVNKDAVVSELIAQGCYMMTKEETDRVCSLLFRGILDGHPVMNAKFVGQAATTIAEAAGI
RVPVDTKLLIGSQSGVGEGNPLSFEKLTTVLGFYVVKNWEEACALSIRLLQNGIGHTMSLHTSDPDIIFKFSSKPASRIL
INTGGSQGGTGVSTGLPIAFTLGCGTDGGSSVSDNLTPEHLINVKTVAYGIKDVTKLVAEDDYFHTLPKVAVCNRPNEKV
DGLSSASLKVKQEIVTKKDFLNQTPQQIQVNFEKNNPPSSHEVPSNATVTSDDETNEAIVREILSTLKIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42076.1 hypothetical protein Not tested PAI II 536 Protein 9e-80 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCIM_0644 YP_006469546.1 aldehyde dehydrogenase VFG1595 Protein 5e-80 48