Gene Information

Name : A3UG_13460 (A3UG_13460)
Accession : YP_006478120.1
Strain : Enterobacter cloacae SDM
Genome accession: NC_018079
Putative virulence/resistance : Virulence
Product : type VI secretion system protein ImpC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2893295 - 2894794 bp
Length : 1500 bp
Strand : -
Note : COG3517 Uncharacterized protein conserved in bacteria

DNA sequence :
ATGAGCAACCAGACTCAACAACACGAGCAGCAGGCAGGTCAGGCGTTCAGCCAGGACGAGTTCAGCGCGCTGCTGAACAA
AGAGTTCCGCCCTAAAACTGACCAGGCGCGTTCCGCCGTTGAGAGCGCGGTAAAAACTCTGGCGCAGCAGGCGCTGGAAA
ATACCGTTACTTTCTCCAACGACACCTATCGCACCATCCAGAACCTGATCGCCGGTATCGACGAACAGCTGTCTCAGCAG
GTGAATCAGATCATTCACCACGACGAGTTTCAGAAGCTGGAGAGCGCCTGGCGCGGTCTGAGCTACCTGGTGAACAACAC
TGAAACCGACGAGATGCTGAAGATCCGCTTTATGAGCATCTCCAAGCAGGAGCTGGGCCGCACCCTGAAACGCTATAAGG
GTGTGGGCTGGGATCAGAGCCCGATCTTCAAGAAAATCTACGAGCAGGAGTACGGTCAGTTTGGTGGTGAGCCGTTTGGC
TGCATCGTTGGCGACTATTACTTTGACCACAGCCCGCAGGACGTTGAACTGCTGGGTGAAATGGCGCGCATCGGCTCTGC
GGCCCACTGTCCGTTCATCACCGGTACCGCACCGGGCGTGATGCAGATGGAGTCCTGGCAGGAACTGGCTAACCCGCGCG
ATCTGACCAAAATCTTCCAGAACACCGAATACGCCGCCTGGCGTTCACTGCGTGAATCGGAAGATGCCCGCTATCTGGGC
CTGGTGATGCCGCGCTTCCTGTCGCGTCTGCCTTACGGCATTCGTACTAACCCGGTCGACAGCTTTGACTTTGAAGAGCA
GACCGACGGCGCGAACCACAACAGCTACGCCTGGGCGAACGCCGCTTACGCGATGGCCGCTAACATCAACCGCTCTTTCA
AAGAGTACGGCTGGTGCACCTCGATTCGCGGCGTGGAGTCCGGCGGGGCGGTCGAAAACCTGCCGTGCCACACCTTCCCG
AGCGATGACGGCGGCGTGGACATGAAATGTCCGACCGAGATCGCCATCAGCGACCGTCGTGAAGCCGAGCTGGCGAAAAA
CGGCTTTATGCCGCTGGTTCACCGCAAAAACTCCGACTTTGCTGCCTTTATCGGCGCGCAGTCGCTGCAAAAACCGGCGG
AGTACCATGACCCGGATGCCACCGCCAACGCGCGTCTGGCCTCCCGTCTGCCGTACCTGTTCGCCTGCTGCCGCTTTGCG
CATTACCTGAAGTGCATCGTGCGTGACAAAATCGGCTCCTTCCGCGAGCGCGAAGAGATGGAACGCTGGCTGAACGACTG
GGTCATGAACTACGTGGACGGTGACCCGGCCAACTCCTCTCAGGAGACCAAGTCCCGCAAGCCGCTGGCCGCTGCAGAAG
TGCAGGTGCAGGAGATTGAAGACAACCCGGGCTACTACGCCGCGAAGTTCTTCCTGCGTCCGCACTACCAGCTGGAAGGT
CTGACCGTTTCTCTGCGTCTGGTATCTAAACTGCCGTCGCTGAAGACGAAAGACGCGTAA

Protein sequence :
MSNQTQQHEQQAGQAFSQDEFSALLNKEFRPKTDQARSAVESAVKTLAQQALENTVTFSNDTYRTIQNLIAGIDEQLSQQ
VNQIIHHDEFQKLESAWRGLSYLVNNTETDEMLKIRFMSISKQELGRTLKRYKGVGWDQSPIFKKIYEQEYGQFGGEPFG
CIVGDYYFDHSPQDVELLGEMARIGSAAHCPFITGTAPGVMQMESWQELANPRDLTKIFQNTEYAAWRSLRESEDARYLG
LVMPRFLSRLPYGIRTNPVDSFDFEEQTDGANHNSYAWANAAYAMAANINRSFKEYGWCTSIRGVESGGAVENLPCHTFP
SDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHRKNSDFAAFIGAQSLQKPAEYHDPDATANARLASRLPYLFACCRFA
HYLKCIVRDKIGSFREREEMERWLNDWVMNYVDGDPANSSQETKSRKPLAAAEVQVQEIEDNPGYYAAKFFLRPHYQLEG
LTVSLRLVSKLPSLKTKDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-79 41
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 1e-79 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A3UG_13460 YP_006478120.1 type VI secretion system protein ImpC VFG2070 Protein 6e-176 75
A3UG_13460 YP_006478120.1 type VI secretion system protein ImpC VFG2093 Protein 2e-83 42
A3UG_13460 YP_006478120.1 type VI secretion system protein ImpC VFG2475 Protein 7e-83 42