Gene Information

Name : PADK2_07960 (PADK2_07960)
Accession : YP_006481587.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Virulence
Product : TonB-dependent receptor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1728194 - 1730359 bp
Length : 2166 bp
Strand : +
Note : COG4772 Outer membrane receptor for Fe3+-dicitrate

DNA sequence :
ATGTCGTCCGTGAGTTCGTTGTCGCGCCTGGCCGTCGCCATCGCGCTGGGTGTGTCCATGCAGGCGGCGCAGGCCGAAGA
GGAAGCCAAGGAGCTGGGCACGGTCACCGTGGTCGGCGACTGGCTGGGCGAAGCCGACCAGGCGGTGGTGCAGAACCATC
CCGGCGCGCGCAGCGTGGTGCGTCGTCGGGAAATGCTCGAGAGCGGTGCGCAGAACGTCCGCGACGTGCTGCGCAAGGTG
CCCGGCGTGCAAGTGCAGGACAACAACGGTACCGGCGGCAGCGACATCTCCCTGAACGTCGGGGTGCGTGGCCTGACTTC
ACGCCTGTCGCCGCGCTCGACGGTGATGATCGACGGCGTGCCGGCGGCGGTGGCGCCCTACGGCCAGCCGCAGCTGTCGA
TGATGCCGCTGTCCATCGGCAACCTGGAGAGTATCGACGTCGTGCGCGGCGCCGGCTCGGTGCGCTACGGCCCGCAGAAC
GTCGGCGGGGTGATCAACTTCGTGACCCGGGCGATTCCGGAGAAGTTCTCCGGCGAAATCGGCACCACCATCGAGCATGC
CGGCCACGGCGGCTGGAAGAAGCTCAACCAGGCGTTCCTCGGCGGGACCGCCGACAACGGCCTGGGCGTGGCGCTGCTGT
ATTCCGGGGTGAAGGGCGCCGACTACCGCGACGGCAACAACGACAACGATATCGACGACGTGCTGCTCAAGACCCATTGG
CAGCTCACCGACAGCGACCAGTTGGCGGCCAACTTCCACTACTACGACGCCTACGCCGATATGCCGGGCGGCCTGACCCA
GGCGCAGTACGACGACGATCCCTTCCAGTCGGTACGCGACTGGGACAATTTCCGTGGTCGGCGCAAGGACTTCTCGCTGA
AGTACACCCGCCAGGTCGACGACCTCACCCAGTTCGAGGTGCTCACCTACTACAGCGACAGTTTCCGCGGCAGCAGCATC
GCCGCGCGCAACCTCAGGACCATCACCTCGTACCCGCGCGACTACCATGTGTTCGCGGTGGAGCCGCGGGTCTCGCGGAT
CTTCTTCGCCGGCCCGACCACCCAGGAGGTCGGCATCGGCTACCGCTACCTGAAGGAAGCGATGAACGAGCGCGCCAGCC
AGCTGGCCCTGGTCGACAATGTGCCGACCGTGCGTCCCGGCTCGGACGGCCATACCTACCAGGACCGTACCGGCGGTACC
GAGGCCAGCGCCTTCTACATCGACGACAAGATCGATGTCGGCAACTGGACCATCACCCCCGGCATCCGCTTCGAGAAGAT
CGACAGCGACTGGCGCGACCGCCCGGTGCTCGGCCTGAACGGCAAGCCGGTGCAGGAGAAGAAGCGCAGCAAGGACTACA
ACGAACCGCTGCCGGCGCTGAGCCTGATGTATCACTTGAGCGACGAGTGGAAGCTGTTCGCCAACTACTCCGAATCGTTC
GGCAGCCTGCAGTACTTCCAGCTCGGCCAGGGCGGCAGCGGCAACGATACCGCCGCCGGCCTGGAGCCGGAGAAGGCCAA
GACCTACGAACTGGGCACGCGCTACGACAACGGCAGCTGGGGCGGCGAGATCACGCTGTTCTACATCGACTTCGACGACG
AGCTGCAGTACGTCAGCAACGACGTCGGCTGGACCAACCTCGGCGCCACCAAGCACCAGGGCATCGAGACTTCCGGCCAC
TATGACTTCGCCGCTCTCGATCCGCGCCTGGACGGCCTGTCGGTCTACGGCAGCCTCACCTATACCCGTGCCACCTACGA
AGGCGACATTCCCTCCTTCAAGGGGCGCGACCTGCCGCTCTACTCGCGCCAGGTGGCCACCGCCGGGGTGCGCTACGAGG
TCGACCGCTGGACCTACAACCTCGACGCCTTCGCCCAGTCCATGCAGCGCGCGCCAGGGCTGAGCACCGACAGCCAGGGC
AACTTCACCCACAACTACATCACCGAGCCCAGCGCCGACGGCCAGTACGGCGACATTCCCGGCTACGTGACCTGGAATGC
CCGCGTCGGCTACGACTTCGGCCCGCAGGCGTCGAACCTGAAGCTCGGACTCGGGGTGAAGAACCTGTTCGACAAGCAGT
ATTTCACCCGCTCCAGCGACAACAATTCGGGAATCTACGTGGGTCAGCCGCGAACGCTGTTCATGCAGGCCAGCGTCGGT
TTCTGA

Protein sequence :
MSSVSSLSRLAVAIALGVSMQAAQAEEEAKELGTVTVVGDWLGEADQAVVQNHPGARSVVRRREMLESGAQNVRDVLRKV
PGVQVQDNNGTGGSDISLNVGVRGLTSRLSPRSTVMIDGVPAAVAPYGQPQLSMMPLSIGNLESIDVVRGAGSVRYGPQN
VGGVINFVTRAIPEKFSGEIGTTIEHAGHGGWKKLNQAFLGGTADNGLGVALLYSGVKGADYRDGNNDNDIDDVLLKTHW
QLTDSDQLAANFHYYDAYADMPGGLTQAQYDDDPFQSVRDWDNFRGRRKDFSLKYTRQVDDLTQFEVLTYYSDSFRGSSI
AARNLRTITSYPRDYHVFAVEPRVSRIFFAGPTTQEVGIGYRYLKEAMNERASQLALVDNVPTVRPGSDGHTYQDRTGGT
EASAFYIDDKIDVGNWTITPGIRFEKIDSDWRDRPVLGLNGKPVQEKKRSKDYNEPLPALSLMYHLSDEWKLFANYSESF
GSLQYFQLGQGGSGNDTAAGLEPEKAKTYELGTRYDNGSWGGEITLFYIDFDDELQYVSNDVGWTNLGATKHQGIETSGH
YDFAALDPRLDGLSVYGSLTYTRATYEGDIPSFKGRDLPLYSRQVATAGVRYEVDRWTYNLDAFAQSMQRAPGLSTDSQG
NFTHNYITEPSADGQYGDIPGYVTWNARVGYDFGPQASNLKLGLGVKNLFDKQYFTRSSDNNSGIYVGQPRTLFMQASVG
F

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 1e-135 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_07960 YP_006481587.1 TonB-dependent receptor VFG1047 Protein 6e-136 45