Gene Information

Name : PADK2_15395 (PADK2_15395)
Accession : YP_006483060.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3334181 - 3334687 bp
Length : 507 bp
Strand : -
Note : COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

DNA sequence :

ATGGGCATGGATCAGACACGCAATCGCCTCGTCGGCCTGATGTTCCAGAACGACTATTCCTGGCTGAGCGGGCGCCTGCG
GCGCTACCTCGGCTGCCCCCACAGCGCCGAGGACATCGCCTCGGAAACCTTCCTCAAGGTCCTTGCCCTGCCGGATCCGG
CAAGCATCCGCGAGCCGCGCGCGCTGCTCACCACCATCGCTCGCCGGCTGATGTACGACGGCTGGCGGCGCCAGGACCTG
GAACGCGCCTACCTGGAAAGCCTGGCCGGGCTTCCGGAGGCCCTCGCGCCGTCCGCCGAGGAGCAGGCCCAGGTGGTGGA
AACCCTGCTGCGCCTGGAGCGCATGCTCGCCGGGCTGTCGCCGAAGGCCCGCGCCGCCTTCATCCATAGCCAGATCGGCG
GACTGACCTACGTGGAGATCGCCGGCTTGCTGGAGGTTTCCGTCAGCCGCATCCACCAGTACATGGTCGAGGGCTTCAAG
CAGTGCTACCAGGTGCTTGCCGAATGA

Protein sequence :

MGMDQTRNRLVGLMFQNDYSWLSGRLRRYLGCPHSAEDIASETFLKVLALPDPASIREPRALLTTIARRLMYDGWRRQDL
ERAYLESLAGLPEALAPSAEEQAQVVETLLRLERMLAGLSPKARAAFIHSQIGGLTYVEIAGLLEVSVSRIHQYMVEGFK
QCYQVLAE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	3e-28	46

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PADK2_15395	YP_006483060.1	RNA polymerase sigma factor	VFG1049	Protein	1e-28	46