Gene Information

Name : csoS1A_2 (HMPREF9154_2984)
Accession : YP_006513115.1
Strain : Propionibacterium propionicum F0230a
Genome accession: NC_018142
Putative virulence/resistance : Virulence
Product : major carboxysome shell protein 1A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3226486 - 3226758 bp
Length : 273 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCAATGCTCTCGGAATGATCGAGACCAAGGGCTACGTGGGGGCCGTCGAGGCCGCCGACGCCATGGTCAAGTCCGC
GAACGTGACCCTGATCGGCAGCGAGAAGATCGGTTCCGGTCTTGTCACCGTGATGGTGCGCGGCGACGTCGGTGCCGTGA
AGGCCGCCGTCGACGCCGGGTCGTCGGCCGCCGCCCGGGTCGGCGAACTGGTCTCCCAGCACGTCATCCCGCGTCCCCAC
GGTGACGTCGAGAAGATCCTGCCGCAGTCATGA

Protein sequence : 
MSNALGMIETKGYVGAVEAADAMVKSANVTLIGSEKIGSGLVTVMVRGDVGAVKAAVDAGSSAAARVGELVSQHVIPRPH
GDVEKILPQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-13 67
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-12 66
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-12 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
csoS1A_2 YP_006513115.1 major carboxysome shell protein 1A VFG1596 Protein 1e-13 67
csoS1A_2 YP_006513115.1 major carboxysome shell protein 1A VFG1598 Protein 2e-12 66
csoS1A_2 YP_006513115.1 major carboxysome shell protein 1A VFG1597 Protein 6e-13 65