|
Name : PSJM300_06020 (PSJM300_06020) Accession : YP_006523636.1 Strain : Pseudomonas stutzeri DSM 10701 Genome accession: NC_018177 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 1302591 - 1304564 bp Length : 1974 bp Strand : + Note : COG1138 Cytochrome c biogenesis factor DNA sequence : ATGATCCCCGAGCTTGGCCATCTGGCGATGATTCTGGCGTTGTGTCTGGCGGTGGTGCAGGGCACCTTGCCGCTGGTCGG CGCCTGGCGCGGCGACCGGGTCTGGATGGGGCTGGCGCAACCGGCCGCCTGGGGGCAGTTCAGTTTCCTCGCGTTCTCCT TCTTTTGCCTGACCTACGCCTTCATGACCGATGATTTCTCGGTGGCCTATGTCGCGCAGAACTCCAACAGCGCCTTGCCC TGGTACTACAAGTTCAGCGCTGTCTGGGGCGCGCACGAGGGCTCCCTGTTGCTCTGGGCGTTCATCCTGGCCGGCTGGAC CTTCGCGGTGGCGATCTTCTCCCGTCAGCTGCCGGAAGACATGCTGGCCCGGGTGCTGGGTGTGATGGGGCTGATCAGCA TCGGCTTCCTGCTGTTCCTGATCGTCACCTCGAACCCCTTCGAGCGCTTGCTGCCGCAATCGCCGATGGACGGGCGCGAC CTCAACCCGCTGCTGCAGGACTTCGGCCTGGTGGTGCACCCGCCGATGCTGTACATGGGCTACGTAGGCTTCTCGGTGGC CTTCGCGTTCGCCATCGCGGCCCTGCTCGGCGGCCGCCTGGATGCGGCCTGGGCGCGCTGGTCGCGGCCCTGGACGCTGA TCGCCTGGGCATTCCTCGGCACCGGTATCGCACTGGGCTCCTGGTGGGCCTATTACGAGCTGGGCTGGGGTGGCTGGTGG TTCTGGGATCCGGTGGAGAACGCCTCGTTCATGCCCTGGCTGGTCGGCACCGCGCTGATTCATTCGCTGGCCGTGACGGA AAAGCGCGGCGTCTTCAAGAGCTGGACGGTCCTGCTGGCCATCGCCGCGTTCTCCTTGAGCCTGCTGGGTACCTTCCTGG TACGTTCGGGTGTGCTCACTTCGGTACATGCCTTCGCGACCGATCCGGCCCGGGGCGTGTTCATCCTGGTGTTCCTGTTG CTGGTGGTCGGCGGTTCGCTGACGCTGTTCGCGTTGCGCGCGCCGGTGGTCAAGAGTCAGGTGGGCTTCGGCTTGTGGTC GCGGGAAACCCTGCTGCTGGTCAACAACCTACTGCTGGTCGTTGCTACCGCGATGATACTGCTGGGAACGCTCTATCCAT TGCTGCTCGATGCCTTGTCCGGCGCCAAGCTCTCCGTCGGCCCGCCGTACTTCAACGCGATGTTCCTGCCGCTGATCGGG GTATTGATGCTGACCCTGGGCGTCGGCGTTCTGGTGCGCTGGAAGGATACGCCGCTGCAGTGGCTGCTGGGCATGCTGAC GCCGGTGCTGATCGTCGGTGCGATCCTCGGTGGTCTGGGTTCGATGGTCTTCGGTGATTTCCACTGGGCGGTGCTGGCGG TCTGCCTGCTGTCGGCCTGGGTCGTCATCGCCGGCGTGCGCGACGTGCTCGACAAGACGCGTCACAAGGGCCTGCTGAAG GGCGCGCGCAGTTTGACGCCGAGCTACTGGGGCATGCACCTGGCGCATTTCGGCCTGGTGGTCTGTGCGATGGGCGTGGT GCTGGTGAGTCAGCAGAGCGATGAGCGCGACCTGCGTCTGGCACCGGGCGAGTCGCTCGAACTCGGCGGCTATCGCTTCG TATTCGAAGGCGCCCAGCATTTCGAAGGGCCCAACTACACCTCGGACAAGGGCACCATCCGGGTCTTCGATGGCGACAAG CGGATCGCCACCCTGCATCCGGAGAAGCGCCTGTATACCGTGCAGCAGATGCCGATGACCGAGGCGGGCATCGACCCGGG CTTTACCCGCGACCTTTATGTGGCGCTGGGTGAGCCGCTGGAAAACGGCGCATGGGCCGTGCGCGTGCATATCAAGCCGT TCGTGCGCTGGATATGGCTGGGCTCTCTGCTGATGGCTCTGGGTGGCGTGCTGGCGGCGAGCGACCGGCGCTACCGAGTG AAAGTCAAAACCCGCGTGCGCGAAGCCCTGGGCCTGGCGCCACAAGGAGCCTGA Protein sequence : MIPELGHLAMILALCLAVVQGTLPLVGAWRGDRVWMGLAQPAAWGQFSFLAFSFFCLTYAFMTDDFSVAYVAQNSNSALP WYYKFSAVWGAHEGSLLLWAFILAGWTFAVAIFSRQLPEDMLARVLGVMGLISIGFLLFLIVTSNPFERLLPQSPMDGRD LNPLLQDFGLVVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTLIAWAFLGTGIALGSWWAYYELGWGGWW FWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFATDPARGVFILVFLL LVVGGSLTLFALRAPVVKSQVGFGLWSRETLLLVNNLLLVVATAMILLGTLYPLLLDALSGAKLSVGPPYFNAMFLPLIG VLMLTLGVGVLVRWKDTPLQWLLGMLTPVLIVGAILGGLGSMVFGDFHWAVLAVCLLSAWVVIAGVRDVLDKTRHKGLLK GARSLTPSYWGMHLAHFGLVVCAMGVVLVSQQSDERDLRLAPGESLELGGYRFVFEGAQHFEGPNYTSDKGTIRVFDGDK RIATLHPEKRLYTVQQMPMTEAGIDPGFTRDLYVALGEPLENGAWAVRVHIKPFVRWIWLGSLLMALGGVLAASDRRYRV KVKTRVREALGLAPQGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 7e-129 | 59 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-109 | 56 |
