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Name : secD (PSJM300_12810) Accession : YP_006524982.1 Strain : Pseudomonas stutzeri DSM 10701 Genome accession: NC_018177 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 2816261 - 2818129 bp Length : 1869 bp Strand : + Note : COG0342 Preprotein translocase subunit SecD DNA sequence : ATGCTCAATAGATTCCCCCTCTGGAAATACCTGCTGATACTGGTGGTGCTGGCGGTTGCCTGCATCTATTCGGCGCCCAA TCTCTATCCCGACGACCCGGCTGTCCAGATCACCGGCGCGACCACTTCGTTGAACGTGACCGAGGCTGATCTGAGTCGGG CCGGTGCAGCGCTCGAAGAGGCCGGGATCGAGGTCAAGGAGACTTCACTAGACGAACAGGGCCGCGGCGGTCTGTTGCGG TTGGCGCATCAGGACGATCAGCTGCCGGCCAAGGACGTGATCCGTCGTGCCCTCGGTGATGCCTACGTCGTTGCCCTCAA CCTTGCGCCGACCACGCCCGACTGGTTGCGCAATCTCGGCGCGAGCCCGATGAAGCTCGGCCTGGACCTGTCCGGCGGCG TGCACTTCCTGCTCGAAGTGGATATGGACAAGGCCGTCGAAACGCGCCTGAACGTCCACGAGGGTGAGGTCAAGAGCTTG CTGCGCAAGGAGCGTGTTCGCTACCGCAGCCTGCCGACCCAGGGCAATGCGGTGCAACTGGGCTTTGCCGATCAGGCCAC GCTGTCTTCTGCCCAGGCGCTGATCCGCAAGAATTTCAACGATTTCGAGATCACCTCCAGCGAGCGCAATGGCCAGCAGG TGCTGCGCCTGGCCCTCACCGAGGCGAAGCTGGCGGAGATTCGCGAATACTCCATCAAGCAGAACCTCACCACGGTTCGC AACCGGGTCAACGAGCTGGGCGTTTCCGAGCCGCTGGTGCAGCGCCAGGGCGCCAACCGTATCGTGGTCGAATTGCCGGG CGTGCAGGATACTGCCGAAGCCAAGCGCATCCTCGGCAAGACCGCCAACCTGGAGTTCCGTCTGGCAGCCGAAGCGGATG CTCCGCGCGCGACCACCGAGACCTTCGAATTCCGCCAGGAAGGTCGCCCGCCAGCGCAGCTGGAGCGCACGCTGATCATC ACTGGTGATCAGGTCACCGATGCCCAGGCCAGCTATGACGAGAATGGTCGTCCGCAGGTCAACATCCGTCTGGATGGCCA CGGCGGCGAGCTGATGAACCGGGCCACACGCAACAATGTCGGTCGCAGCATGGCGGTTGTCTTCATCGAGCAGCGGCCGC AGACGCGTTACGTGAAGCGGATGGTCGACGGCGTCGAGCAGGAAGAGCGAATCGAGACCTTTCAGGAGGAGAAGAAAATC ATCAGCCTGGCGACCATCCAGTCGCCGCTGGGCAGTCAGTTCCGTATCACCGGGCTCGATGGCCAGGGTGAGTCGTCCGA GCTGGCACTGTTGCTCCGTGCCGGTGGTCTGGCGGCCCCGATGTACTTTGCCGAAGAGCGCACCATCGGCCCGAGCCTGG GCGCCGAGAACATCACGCTGGGCGTTCAGGCGGCGCTGTGGGGCTTCCTGTTCGTCGCGATCTTCATGGTGCTGATCTAC AAGGTCTTCGGGCTGCTGGCAACCGTGGCACTGCTGTTCAACATGGTGGTGTTGATGGCGCTGATGTCGCTGCTGGGTGC GACGCTGACCCTGCCGGGTATCGCCGGTATCGTGCTGACCATGGGTATGGCGGTGGATGCCAACGTGCTGATCTTCTCGC GGATCCGTGAGGAGATTCAGAACGGCATGTCGGTGCAGCGAGCCATTCACGAGGGTTTCGATCGCGCGCTTTCCGCCATC GTCGACGGCAACCTCACCACGCTGCTGGTGGGTGGCATTCTCTTCGCCATGGGCACTGGGCCGATTAAGGGCTTCGCGGT CACGCTGTCGCTCGGCATTCTGACGTCGATGTTCACGGCGGTTATCGTGACTCGCGCCATGGTCAACCTGATCTATGGTG GCCGCGATCTCAAGAAGCTGTGGATTTAA Protein sequence : MLNRFPLWKYLLILVVLAVACIYSAPNLYPDDPAVQITGATTSLNVTEADLSRAGAALEEAGIEVKETSLDEQGRGGLLR LAHQDDQLPAKDVIRRALGDAYVVALNLAPTTPDWLRNLGASPMKLGLDLSGGVHFLLEVDMDKAVETRLNVHEGEVKSL LRKERVRYRSLPTQGNAVQLGFADQATLSSAQALIRKNFNDFEITSSERNGQQVLRLALTEAKLAEIREYSIKQNLTTVR NRVNELGVSEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRLAAEADAPRATTETFEFRQEGRPPAQLERTLII TGDQVTDAQASYDENGRPQVNIRLDGHGGELMNRATRNNVGRSMAVVFIEQRPQTRYVKRMVDGVEQEERIETFQEEKKI ISLATIQSPLGSQFRITGLDGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGAENITLGVQAALWGFLFVAIFMVLIY KVFGLLATVALLFNMVVLMALMSLLGATLTLPGIAGIVLTMGMAVDANVLIFSRIREEIQNGMSVQRAIHEGFDRALSAI VDGNLTTLLVGGILFAMGTGPIKGFAVTLSLGILTSMFTAVIVTRAMVNLIYGGRDLKKLWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 80 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 80 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 80 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 80 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 80 |
