Gene Information

Name : PSJM300_18925 (PSJM300_18925)
Accession : YP_006526196.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-70 factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4109538 - 4110053 bp
Length : 516 bp
Strand : -
Note : COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

DNA sequence :

ATGGCCACCGAGGGTATGCTCCGGCAGCAGTTGCTGCATCGGCTGTATGTCGATCACCAGGGCTGGCTGAACGGCTGGTT
GCGGCGTCAACTGGGCTGCAGCCAGAGCGCTGCCGACCTGGCGCAGGACACCTTCGTGCGGCTGCTGGGCAAGGATCAGG
ACATGACCGCGATCCGCGAGCCCAGGGCCTACCTGCATACCATCGCCAAGGGGCTGCTGATCAACCACTGGCGCCGCCGC
CAGGTGGAACAGGCCTATCTCGATGCCCTGGCACTGCAGCCGGAAGCGCTCGCGCCTTCGCCGGAATCCCAGGCGCTGAT
CGTCGAGACCTTGCTGCGCATCGACGCGATGCTGGCCCGGCTGCCCGCAAAGGTGAGCGCGGCATTTCTCATGTCCCAGC
TGCACGGGATGACCTATGCGGCGATTGCGGCGGAGCTGGGCGTTTCCGAACGCATGATCAAGAAATACATGGCGCAGGCG
ATGCTGCATTGCCTGTTGCTGGTTGAAGAGCCATGA

Protein sequence :

MATEGMLRQQLLHRLYVDHQGWLNGWLRRQLGCSQSAADLAQDTFVRLLGKDQDMTAIREPRAYLHTIAKGLLINHWRRR
QVEQAYLDALALQPEALAPSPESQALIVETLLRIDAMLARLPAKVSAAFLMSQLHGMTYAAIAAELGVSERMIKKYMAQA
MLHCLLLVEEP

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	1e-33	49

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PSJM300_18925	YP_006526196.1	ECF subfamily RNA polymerase sigma-70 factor	VFG1049	Protein	6e-34	49