Gene Information

Name : PSJM300_02640 (PSJM300_02640)
Accession : YP_006522964.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Virulence
Product : outer membrane receptor FepA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 582247 - 584454 bp
Length : 2208 bp
Strand : +
Note : COG4771 Outer membrane receptor for ferrienterochelin and colicins

DNA sequence :
ATGATCTTATCGTCGTACCCATCACTCAGCCGACTTGCCGCCGCCACGCTGCTGGCGATGCCGGTGCTGGTCGCCCATGC
CCAGGACGAGGCGCTGCAATTGCAGGACATCGAAATCCTGGCCACGGCCCAGGAGGAGCTCAAGCAGGCGCCCGGCGTCT
CGATCATCACCGCCGAGGACATCCGCAAGGCGCCGCCTGCCAACGACATCGCCGAGATCATCCGCAAGCAGCCGGGGGTC
AACCTGACCGGCAACAGTGGTTCCGGCGCGCGCGGCAACAACCGGCAGATCGACATCCGCGGCATGGGGCCGGAGAACAC
GCTGATCCTGGTCGATGGCAAGCCGGTCACCTCGCGCAACTCCGTTCGCTACGGCTGGCGAGGTGACCGCGATACCCGCG
GCGACACCAACTGGGTTCCGGCCGAACAGATCGAGCGCATCGAGGTCCTGCGTGGCCCGGCGGCAGCGCGCTACGGCAAT
GGCGCGGCGGGCGGGGTGATCAACATCATCACCAAGGCGCCGGGCACGGAGCACCACGGCAACGCCACGCTGTACATGAA
CATGCCGCAGCATGACGAGGAAGGGGCCAGCAAGCGCATCAACTTCGGGCTCAACGGCCCGCTGACCGAAAGCCTCTCCT
ATCGCCTGTACGGCAACCTGAACAAGACCGATATGGATGACGAGGACATCAACGCCGGCCATACCATCGGTAACTTCACC
ACCTCCGGCCGTGAGGGCGTGCGCAACAAGGACGTCAATGGCCTGTTGGCCTGGCGCCTGGACGACCAGCAGACCCTGGA
GCTGGAGGCGGGCTTCAGCCGGCAGGGCAACATCTACGCTGGCGACTCGATGAACAACGTCGGCGCCGACTTCATCGTGG
GCTATCGCACACCCTGGATCGGCCGCGAGACCAACACCCTGTACCGGCAGAGCTATGCGCTCACCCACCGCGGCGACTGG
GATTTCGGTACCACGCTCAACTACCTGCAGTACGAGCGGACCCGCAACAAACGCATCGAGGAAGGGCTCGCCGGTGCCAC
GGAGGGGAACTTCAACGGGGCGAACTTCGGCACCACCGAACTGGAAAGCACCACGGCCCACAGCGAGCTCAACCTGCCGC
TGTCCGGTGCCGTCGAACAGGTACTGACCCTGGGTGCCGAGTGGGTCGAGCAGAAGATGGACGATCCCTTCTCCAACACC
CAGACCACCGGTGAGGCCGGCTCGGTGCCCGGCATCAGCGATGCCGGCCGTTCCACCGAGTCATCGGCGCGCATTTCGTC
GCTGTTCATCGAGGACAACATCGAGCTGCGTCCCGGCACCATCCTCACGCCTGGCCTGCGCTTCGACCATCACAGCACCG
TCGGCAGCAACTGGAGCCCCTCGCTCAACCTGTCCCAGGATCTGGGTAGCGATTTCGTCCTCAAGGCCGGCATCGCCCGC
GCCTACAAGGCGCCGAACCTCTACCAGCTCAACCCCGACTACCTGCTCTACAGCCGTGGCACGGGCTGCTGGGGCGGAAA
CGGCAGCTGCTACCTGCAGGGCAACGACAAGTTGGATGCTGAAACCAGCGTCAACAAGGAGCTGGGCATCGAGTTCCGCC
GTGACGACTGGGTCGCCGGCGTCACCTGGTTCCGCAACGACTATCGAGACAAGATCGAGGCCGGGCGCGCTCCGGTCGGC
AGCGCTGTTGGCGGCAGCAACCCTGGATACGCCGATGCCGACGTCTTTCGCTGGGAAAACGTGCCGCGGGCCGTTGTCGA
AGGTCTCGAGGGCACGCTCAAGGTGCCGCTGGCCGCGCGCCTGGACTGGAGCACCAATTTCACCTACATGCTCCAGTCGA
AGAACAAGGAAACCGGCGAGCCGCTGTCGATCATCCCCAAGTACACGCTCAACTCGACGCTCGACTGGCAGGTGACCGAG
CCGCTGTCGTTGCAGGGTACGGTGACCTGGTATGGCAAGCAGACGCCCGGTCGCTACGACTACCAGGGCAACGAGCTCAG
TGGCGATGCCCGCCGACAGATCTCGCCTTATGCGCTGGTCGGCCTCAGCGGCACCTATGCGTTCAGCGACCAGCTGAGCC
TGAGCGCCGGCGTCAGCAACCTGTTCGACGAGCGGCTGTATCGCGAGGGGAACGCCCGTGAAGCGGGGGCCTATACCTAC
AACGAACCGGGCCGGACCTTCTTCACCAGCATCAGCACGTCGTTCTAA

Protein sequence :
MILSSYPSLSRLAAATLLAMPVLVAHAQDEALQLQDIEILATAQEELKQAPGVSIITAEDIRKAPPANDIAEIIRKQPGV
NLTGNSGSGARGNNRQIDIRGMGPENTLILVDGKPVTSRNSVRYGWRGDRDTRGDTNWVPAEQIERIEVLRGPAAARYGN
GAAGGVINIITKAPGTEHHGNATLYMNMPQHDEEGASKRINFGLNGPLTESLSYRLYGNLNKTDMDDEDINAGHTIGNFT
TSGREGVRNKDVNGLLAWRLDDQQTLELEAGFSRQGNIYAGDSMNNVGADFIVGYRTPWIGRETNTLYRQSYALTHRGDW
DFGTTLNYLQYERTRNKRIEEGLAGATEGNFNGANFGTTELESTTAHSELNLPLSGAVEQVLTLGAEWVEQKMDDPFSNT
QTTGEAGSVPGISDAGRSTESSARISSLFIEDNIELRPGTILTPGLRFDHHSTVGSNWSPSLNLSQDLGSDFVLKAGIAR
AYKAPNLYQLNPDYLLYSRGTGCWGGNGSCYLQGNDKLDAETSVNKELGIEFRRDDWVAGVTWFRNDYRDKIEAGRAPVG
SAVGGSNPGYADADVFRWENVPRAVVEGLEGTLKVPLAARLDWSTNFTYMLQSKNKETGEPLSIIPKYTLNSTLDWQVTE
PLSLQGTVTWYGKQTPGRYDYQGNELSGDARRQISPYALVGLSGTYAFSDQLSLSAGVSNLFDERLYREGNAREAGAYTY
NEPGRTFFTSISTSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroN CAC43424.1 IroN protein Virulence PAI III 536 Protein 1e-154 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSJM300_02640 YP_006522964.1 outer membrane receptor FepA VFG0923 Protein 0.0 60
PSJM300_02640 YP_006522964.1 outer membrane receptor FepA VFG1650 Protein 7e-155 53
PSJM300_02640 YP_006522964.1 outer membrane receptor FepA VFG0935 Protein 1e-153 53