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Name : glcD (T1E_0140) Accession : YP_006530790.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit glcD Function : - COG functional category : - COG ID : - EC number : - Position : 160713 - 162212 bp Length : 1500 bp Strand : + Note : - DNA sequence : ATGAATATCCTGTACGACGAACGCGTCGATGGCGCGCTGCCCAACGTGGACCTGGCCGCCCTGTTGCAGGCGCTGCGCGA TGCCCTGCCGGATCTTGAAATCCTGCACCGCGATGAAGACCTCAAACCGTACGAATGCGACGGCCTGTCGGCCTACCGCA CCGTGCCACTGCTGGTGGCGCTGCCCGAGCGCCTGGAGCAGGTGCAGACGCTGTTGAAGCTTTGCCACCAGCGCGGCGTA CCGGTGGTTGCGCGTGGCGCCGGTACCGGCCTGTCTGGTGGTGCCCTGCCGCTGGCCAAGGGCATCCTGCTGGTGATGGC GCGCTTCAACCGTATCCTCGAGGTCAACCCGCAGGGGCGTTACGCCCGCGTGCAACCGGGTGTACGCAACCTGGCCATCT CCCAGGCCGCCGCACCCCATGGTATGTACTACGCACCCGACCCTTCCTCGCAAATTGCCTGCTCGATCGGTGGCAACGTC GCCGAAAACGCCGGTGGCGTGCACTGCCTCAAGTACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGT CGAGGGCGAACGCCTGAGCCTCGGCAGCGATGCCTTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCACCGGCTCCG AAGGCATGCTCGGTATCGTCACCGAAGTCACTGTCAAGCTGCTGCCCAAGCCCCAGGTGGCGCGGGTGATACTGGCCAGT TTCGACAGCGTCGAGGACGCCGGCCGGGCAGTCGCCGACATCATCGCTGCCGGCATCATTCCTGGCGGCCTGGAGATGAT GGACAACCTGGCGATCCGCGCCGCTGAAGACTTCATCCATGCCGGCTACCCGGTGGACGCGGCGGCGATCCTGCTGTGCG AACTGGATGGCGTGGAAGCCGATGTTCACGACGACTGCGCGCGCGTCGCCGCCGTGCTGACCCAAGCCGGGGCCCGCGAG GTGCGCCTGGCCTGCGACGAAGCCGAGCGCGTTCGCTTCTGGGCCGGGCGCAAGAACGCCTTCCCGGCCGTGGGGCGCAT CTCCCCGGACTACTACTGCATGGACGGCACCATCCCGCGCCGCGAGTTACCACGGGTGCTCAAGGGCATCAGCGACCTGT CCGCGGAGTACGGCCTGCGGGTGGCCAATGTGTTCCATGCCGGCGACGGCAACATGCACCCTTTGATCCTGTTCGATGCC AACCTGCCCGGCGAGCTGGCGCGTGCCGAAGCGATCGGCGGCAAGATTCTGGAACTGTGTGTGAAGGTGGGCGGCAGCAT CACCGGTGAACACGGCGTGGGGCGCGAGAAGATCAACCAGATGTGCGCGCAGTTCAACAGCGACGAAATTACCCTGTTCC ACGCGGTGAAGGCCGCCTTCGACCCCCAGGGCCTGCTCAACCCCGGCAAGAACATTCCCACCCTGCACCGCTGCGCCGAA TTCGGCGCCCTGCACGTGCACCAAGGGCAACTGCCCTTCCCCGAGCTGGAGCGCTTCTGA Protein sequence : MNILYDERVDGALPNVDLAALLQALRDALPDLEILHRDEDLKPYECDGLSAYRTVPLLVALPERLEQVQTLLKLCHQRGV PVVARGAGTGLSGGALPLAKGILLVMARFNRILEVNPQGRYARVQPGVRNLAISQAAAPHGMYYAPDPSSQIACSIGGNV AENAGGVHCLKYGLTVHNVLKVDILTVEGERLSLGSDALDSPGFDLLALFTGSEGMLGIVTEVTVKLLPKPQVARVILAS FDSVEDAGRAVADIIAAGIIPGGLEMMDNLAIRAAEDFIHAGYPVDAAAILLCELDGVEADVHDDCARVAAVLTQAGARE VRLACDEAERVRFWAGRKNAFPAVGRISPDYYCMDGTIPRRELPRVLKGISDLSAEYGLRVANVFHAGDGNMHPLILFDA NLPGELARAEAIGGKILELCVKVGGSITGEHGVGREKINQMCAQFNSDEITLFHAVKAAFDPQGLLNPGKNIPTLHRCAE FGALHVHQGQLPFPELERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 0.0 | 82 |
