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Name : glcF (T1E_0142) Accession : YP_006530792.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Unknown Product : glycolate oxidase iron-sulfur subunit Function : - COG functional category : - COG ID : - EC number : - Position : 163274 - 164509 bp Length : 1236 bp Strand : + Note : - DNA sequence : ATGCAAACCAACCTTAGCGAAACCTCGCGCCGCCTGGCCCGCGCCGACGAAGCCGAGCGCATTCTGCGCACCTGCGTACA TTGCGGCTTCTGCACCGCCACCTGCCCCACTTACCAGTTGCTGGGCGACGAACTCGACGGGCCTCGCGGGCGCATCTACC TGATCAAGCAGATGCTCGAAGGCGAGCCGGTCACCGCCAGCACCCAATTGCACCTGGACCGCTGCCTGACCTGCCGCAAC TGCGAAACCACCTGCCCATCGGGGGTGAAGTACCACGACCTGCTGGACATCGGCCGCGCAGTGGTCGAGCAGCAGGTGCC ACGCCCACTCGGCCAGCGCCTGTTGCGCCTGGGCCTGCGTGCGGTGGTGCCGCGCCCGGCACTGTTCAAGGCCCTGACCC GCAGCGGCCAGGCGCTGCGCCCGCTGCTACCGGCCTCACTCAAACGCAAGTTGCCGGCGCAGGTAACCACACCCGGCCAG CGTCCGGCAGTGCGCCATGCGCGCCGGGTACTGATGCTGGAAGGTTGCGTGCAGCCAGCCCTGTCACCCAATACCAATGC CGCGGCTGCGCGGCTGCTCGACCGCCTGGGCATCAGTGTGCAACCCATCCTGCAGGCCGGATGCTGTGGCGCGGTGGACT ATCACCTGAATGCCCAGGAGCAAGGCCTGCAGCGGGCGCGGCGCAATATCGACGCCTGGTGGCCCGCCATCGAAGCGGGT GCCGAGGCTATCGTGCAGACCGCCAGCGGCTGCGGCGCGTTTGTCCGCGACTATGGCCACCTGCTGGAGAAAGACCCCCA TTACGCTGCCAAGGCCGCACGGGTCAGTGCACTTTCCCGCGATCTGGTGGAAATCCTGCGCGATGAGCCGATCGAACAAT TGGCCCTGTGCGCCGAACAGCGCCTGGCCTTCCACTGCCCATGCACCCTGCAGCACGCACTGAAGCTGGGCGGCGCGGTA GAGGCGTTGCTGACACGGCTTGGCTTTACCCTGACCTCGGTGCCCGATGGCCACCTGTGCTGCGGCTCGGCAGGCACCTA TTCGCTGACCCAACCTGAACTGTCACTGCAACTTCGCGACAATCGTCTGAATGCGCTGGAAAGCGGTAAACCGCACCTCA TTGCCACAGCCAACATAGGCTGCCAGGCCCACCTCGACGGAGCTGGACGCACGCCCGTGCGCCACTGGATCGAAATCGTC GAAGCCGCCTTGAACCCGGAGCCCGCCCATGCTTAG Protein sequence : MQTNLSETSRRLARADEAERILRTCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMLEGEPVTASTQLHLDRCLTCRN CETTCPSGVKYHDLLDIGRAVVEQQVPRPLGQRLLRLGLRAVVPRPALFKALTRSGQALRPLLPASLKRKLPAQVTTPGQ RPAVRHARRVLMLEGCVQPALSPNTNAAAARLLDRLGISVQPILQAGCCGAVDYHLNAQEQGLQRARRNIDAWWPAIEAG AEAIVQTASGCGAFVRDYGHLLEKDPHYAAKAARVSALSRDLVEILRDEPIEQLALCAEQRLAFHCPCTLQHALKLGGAV EALLTRLGFTLTSVPDGHLCCGSAGTYSLTQPELSLQLRDNRLNALESGKPHLIATANIGCQAHLDGAGRTPVRHWIEIV EAALNPEPAHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcF | CAE85243.1 | GlcF protein | Not tested | PAI V 536 | Protein | 1e-138 | 73 |
