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Name : cycK (T1E_2085) Accession : YP_006532725.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Unknown Product : Cytochrome c-type biogenesis protein ccmF Function : - COG functional category : - COG ID : - EC number : - Position : 2282824 - 2284812 bp Length : 1989 bp Strand : - Note : - DNA sequence : ATGAACGCAGCACTGGTAGTCCCCGAACTGGGCCAGTTGGCGATGATTCTGGCCATCTGCTTTGCCGTCGTGCAGGCCAG TGTGCCGTTGCTTGGCGCGTGGCGTGGCGACAGCCTGTGGATGAGCCTGGCGCGGCCGGCAGCGTGGGGGCAGTTCGCCT TCCTGGCGTTTGCCTTTGCCTGCCTGACCCATGCCTTCATGACAGACAATTTCTCGGTCGCCTATGTGGCCAGCAACTCC AACAGCGCCTTGCCCTGGTACTACAAGTTCAGTGCGGTGTGGGGCGCCCATGAGGGTTCGTTGCTGCTTTGGGCGCTGAT CCTCGGCGGCTGGACCTTTGCCGTGTCGGTGTTCTCCCGGCAGTTGCCGCAGGTGATGCTGGCCCGCGTGCTGGCGGTAA TGGGCATGATCAGCGTGGGCTTCCTGAGCTTCCTGATCATTACTTCCAACCCGTTCCAGCGCCTGCTGCCGCAGGTGCCG ACCGATGGCCGTGACCTCAACCCGCTGCTGCAGGACTTTGGCCTGATCGTTCACCCACCCATGCTCTACATGGGCTATGT GGGCTTCTCAGTGGCCTTCGCGTTCGCCATTGCCGCCTTGCTCGGCGGCCGGCTGGACGCTGCCTGGGCGCGCTGGTCGC GGCCGTGGACCATCGTCGCCTGGGCTTTCCTGGGTGTTGGCATCACCTTGGGGTCATGGTGGGCCTACTACGAACTGGGC TGGGGTGGCTGGTGGTTCTGGGACCCGGTGGAAAACGCCTCGTTCATGCCTTGGCTGGTGGGCACCGCACTGATCCACTC GCTGGCGGTGACCGAGAAACGCGGGGTATTCAAGAGCTGGACGGTGCTGCTGGCAATTGCCGCATTCTCGCTGAGCCTGC TGGGTACCTTCCTGGTGCGTTCCGGGGTGCTGACCTCGGTGCACGCGTTTGCCGCCGACCCGTCGCGGGGTATTTTCATC CTGTTTTTCCTGCTGTTCGTGGTCGGCGGGTCGCTCACCCTGTTCGCCCTGCGCGCACCGGTGGTCAAGAGCCAGGTCGG TTTCGCCCTGTGGTCGCGTGAAACGCTGCTGCTGGCCAACAACCTGGTGCTGGTGGTCGCGGCGTCGATGATTCTGCTCG GTACCCTGTACCCATTGGTGCTCGATGCCCTGACCGGGGCCAAGCTGTCGGTCGGTCCGCCCTATTTCGACGCCTTGTTC CTGCCACTGATGGCGCTGCTGATGGTGGTGCTGAGCGTGGGCGTGGTGGTGCGCTGGAAGGACACCCCGGGCAAATGGTT GGTCAGCATGATGACCCCGGTATTGATCGGCAGTGCCATCCTTGCCCCGGTTGCCGGCTTTATCGTCGACGACTTCGACT GGCCGACGCTGACGGCCTTCGCCCTGGCCGCCTGGGTAGTGCTTGGCGGGCTGCGTGACATTTTCGACAAGACCCGCCAC AAGGGCCTGGTCAAAGGCCTGCCGGGCCTGGGCCGCAGCTACTGGGGCATGCAACTGGCGCACCTGGGCCTGGCGGTGTG TGCGCTGGGCGTGGTGCTGTCCAGCAACAACAGCGCCGAGCGCGACCTGCGCATGGCGCCGGGCGAAAGCGTGGAGCTGG GTGGCTATCACTTCCTGTTCCAGGGCGCCAAGCACTTCGAGGGGCCGAACTTCATCTCTGACAAGGGCACCATCGTGGTC AGCCGCGATGGCCGTGAAGTGACCACACTGTACCCGGAGAAGCGCCTGTACACCGTGCAACAGTCGATGATGACCGAAGC GGGCATCGACGCCGGCTTTACCCGCGACCTGTACGTCGCGCTTGGCGAGCCACTGGAGAATGGCGCCTGGGCTGTGCGCG TACATATTAAGCCTTACGTCCGCTGGATCTGGCTGGGCGGTCTGCTGACCGGCCTGGGCGGGTTGCTGGCGGCCCTCGAC CGGCGCTACCGCGTCAAGGTCAAGACCCGGGTGCGTGATGTCCTGGGCGTGTCTGGAGCAGCTGCATGA Protein sequence : MNAALVVPELGQLAMILAICFAVVQASVPLLGAWRGDSLWMSLARPAAWGQFAFLAFAFACLTHAFMTDNFSVAYVASNS NSALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSRQLPQVMLARVLAVMGMISVGFLSFLIITSNPFQRLLPQVP TDGRDLNPLLQDFGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGVGITLGSWWAYYELG WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFAADPSRGIFI LFFLLFVVGGSLTLFALRAPVVKSQVGFALWSRETLLLANNLVLVVAASMILLGTLYPLVLDALTGAKLSVGPPYFDALF LPLMALLMVVLSVGVVVRWKDTPGKWLVSMMTPVLIGSAILAPVAGFIVDDFDWPTLTAFALAAWVVLGGLRDIFDKTRH KGLVKGLPGLGRSYWGMQLAHLGLAVCALGVVLSSNNSAERDLRMAPGESVELGGYHFLFQGAKHFEGPNFISDKGTIVV SRDGREVTTLYPEKRLYTVQQSMMTEAGIDAGFTRDLYVALGEPLENGAWAVRVHIKPYVRWIWLGGLLTGLGGLLAALD RRYRVKVKTRVRDVLGVSGAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 9e-111 | 57 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 7e-103 | 57 |
