Gene Information

Name : ccmC (T1E_2088)
Accession : YP_006532728.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2285434 - 2286201 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAATAAGCTGGACGTGGTTCCACAAGCTGGGCTCCCCGAAATGGTTCTATGCCATCAGCGGCCGCATGCTGCCGTG
GCTGGCCGGTGCTGCCGTGCTCCTGCTGCTGGTCGGCATCACCTGGGGCCTGGCCTTCGCCCCCCAGGACTACCAGCAGG
GCAACAGCTTCCGCATCATCTATATCCATGTGCCGGCGGCGATGCTGGCGCAGTCCTGCTATGTGTTGCTGGCGGTGGCC
GGGGTGGTGGGGCTGGTGTGGAAGATGAAACTGGCCGACGTCGCCCTGCAATGTGCCGCGCCCATTGGCGCCTGGATGAC
CGCCGTGGCCCTGGTTACCGGCGCCATCTGGGGCAAGCCGACCTGGGGCAGCTGGTGGGTGTGGGATGCCCGCCTTACGT
CCATGCTCATCCTGCTGTTCCTGTACTTCGGCATTATTGCGCTGGGCCAGGCGATCAGTAATCGTGACAGTGCAGCCAAG
GCCTGTGCGGTGCTTGCGATTGTCGGTGTGGTGAATATCCCGATCATCAAGTATTCAGTGGAGTGGTGGAACACCCTGCA
CCAGGGCGCCACCTTCACCCTTACCGAAAAGCCGGCGATGCCGGCCGAAATGTGGCTGCCGCTGTTGTGCACGGCGCTGG
GTTTCTACTGTTTCTTCGGCGCCGTACTGCTGCTGCGTATGCGCCTTGAAGTGCTCAAGCGCGAAGCACGCGCCAGTTGG
GTCAGGGACGAAGTATTGAACAGCCTGGGGCGGAGGGCCACACAATGA

Protein sequence : 
MKISWTWFHKLGSPKWFYAISGRMLPWLAGAAVLLLLVGITWGLAFAPQDYQQGNSFRIIYIHVPAAMLAQSCYVLLAVA
GVVGLVWKMKLADVALQCAAPIGAWMTAVALVTGAIWGKPTWGSWWVWDARLTSMLILLFLYFGIIALGQAISNRDSAAK
ACAVLAIVGVVNIPIIKYSVEWWNTLHQGATFTLTEKPAMPAEMWLPLLCTALGFYCFFGAVLLLRMRLEVLKREARASW
VRDEVLNSLGRRATQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 1e-38 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ccmC YP_006532728.1 heme exporter protein CcmC VFG1856 Protein 3e-43 50