Gene Information

Name : T1E_2284 (T1E_2284)
Accession : YP_006532924.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2499957 - 2500469 bp
Length : 513 bp
Strand : +
Note : -

DNA sequence : 
ATGATCGACGCCGCGCCGCCACCGGAGCCTGGCCTGCCTGCCCTGTACCGGGAGCATCGCGGCTGGCTTGAAACCTGGCT
GCGCCGGCGTATGGGCAATGCCTGGGATGCCGCCGACCTCAGTCAGGATACTTTTCTGCGCATTCTGGCCAGCGCCCAGC
CGCTGGCAGACATACGCGAACCGCGTGCCTACCTGCTGACCGTGGGCAAGCGTTTGCTCAGCAACTTCCACCAGCGCCGT
AGCCTGGAGCGGGCCTACCTTGATGCCTTGGCGCAGTTGCCCGAGCAACACGTGCCGTCGCCAGAACAGCGCTGGGTACT
GCTCGAAACCCTGCAAGCACTGGATGAATTGCTCGACGGCCTCAAGCCGCCGATACGCAAGGCCTTTCTCTGGAGCCAGC
TGGAAGGCTTGGGCTACGCCGAGATTGGCCAGCGCCTGGGCGTCTGCCAGCGCTCGGTGAAACGCTACATGGCGCAGGCT
TACGAACATTGCCTGTTGGCCGAGTTGCAATGA

Protein sequence : 
MIDAAPPPEPGLPALYREHRGWLETWLRRRMGNAWDAADLSQDTFLRILASAQPLADIREPRAYLLTVGKRLLSNFHQRR
SLERAYLDALAQLPEQHVPSPEQRWVLLETLQALDELLDGLKPPIRKAFLWSQLEGLGYAEIGQRLGVCQRSVKRYMAQA
YEHCLLAELQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 5e-33 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
T1E_2284 YP_006532924.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 2e-33 53