Gene Information

Name : rnhA (T1E_4124)
Accession : YP_006534747.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Unknown
Product : ribonuclease HI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4502167 - 4502613 bp
Length : 447 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGATAGCGTCGAGATGTTTACTGATGGTGCCTGCAAGGGCAACCCTGGCCCGGGTGGCTGGGGCGTGCTGATGAT
CTACAAGGGCGTCGAGAAGGAACTGTGGGGCGGCGAACGTGAGACCACCAACAACCGCATGGAGCTGATGGCCGCGATCC
AGGGCCTGATGTCGCTCAAACGTGAATGCGAGGTGGTGCTGACCACCGACTCGCAGTACGTGATGAAGGGTATTAACGAA
TGGATGGTCAACTGGAAGAAGCGCGGCTGGAAGACCGCCGCCAAGGAGCCGGTGAAGAACGCTGACTTGTGGCAGCAGCT
CGATGAGCAGGTCAACCGCCACAAGGTGACCTGGAAGTGGGTACGCGGCCATATCGGCCACCCCGGCAACGAACGCGCCG
ACCAGCTGGCCAACCGTGGGGTCGATGAGGTGCGCGCCCAGCGTTGA

Protein sequence :
MSDSVEMFTDGACKGNPGPGGWGVLMIYKGVEKELWGGERETTNNRMELMAAIQGLMSLKRECEVVLTTDSQYVMKGINE
WMVNWKKRGWKTAAKEPVKNADLWQQLDEQVNRHKVTWKWVRGHIGHPGNERADQLANRGVDEVRAQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 6e-39 60