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Name : secD (T1E_4159) Accession : YP_006534782.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Unknown Product : Protein-export membrane protein secD Function : - COG functional category : - COG ID : - EC number : - Position : 4539498 - 4541360 bp Length : 1863 bp Strand : + Note : - DNA sequence : ATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAA CCTCTACCCGGATGACCCGGCGGTACAGATCAGCGGTGCCAGCTCGGCGCTGCAGGTGAATCAGGCCGATCTTGATCGCG TCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTG ACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCT GGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCTGGTGGTGTGC ACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTG CGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTCAGCAGGATGGCGGCATCATGCTGGGCTTCGCTGACGATGCCACCCG CGAACAGGCACGTGCCCTGATCCGCAAGAATTTCAATGATTTCGACCTGACCACCACCGACCGCAACGAGCTTGCGGTGC TGCGTCTGGCGCTGACCCAGGCGAAAGTCGCCGAGATCCGCGAATACTCGATCAAGCAGAACCTCACCACCGTGCGCAAC CGCGTGAACGAGCTGGGTGTGGCAGAGCCTCTGGTACAGCGCCAGGGCGCCAACCGTATCGTGGTCGAGCTGCCAGGCGT GCAGGACACCGCCGAAGCCAAGCGTATCCTTGGTAAAACGGCCAACCTGGAGTTCCGCTTCGGTGCCGAACCGGGTGCAT CCAAGGCCACTACCGAGGTGTTCGAGTTCCGTGAGGGCGGCCGCTCCGCCGCAGTCGAGCGGGGCCTGATCATCACGGGT GACCAGGTTACCGACGCCCAGGCCAGCTTCGACGAGCATGGCCGCCCGCAGGTGAACATTCGCCTGGATGGCCACGGTGG CGAGCTGATGAGCCGTGCTACCCGTAGCAACGTCGGCCGTAGCATGGCGGTGATCTTCATCGAGCAGAAGCCGGTTACCC GCTACGTCAAGCAAACCGTCGGCGGCGTCGAGAAGGACGTTGCCGTACAAAGCTTCGTCGAAGAGAAAAAAATCATCAGC CTGGCGACCATCCAGTCGCCGCTTGGCAGCCAGTTCCGCATCACCGGTCTGAACGGCCAGGGCGAATCGTCCGAGCTGGC CCTGCTGCTGCGTGCCGGTGGTCTGGCTGCGCCGATGTACTTCGCTGAAGAACGTACCATTGGCCCAAGCCTGGGGGCTG ACAACATCACCAAGGGTATCGATGCGTCGCTGTGGGGCATGCTGTTCGTCTCGCTGTTCATCATCGCCATCTACCGCGGC TTCGGCGTGATCGCCACCATCGCCCTGGCGGGCAACATGGTCCTGCTGCTGGCGTTGATGTCGCTGCTGGGCGCTACCCT GACGCTGCCGGGTATTGCCGGTATCGTGCTGACCATGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGTATCC GCGAGGAGCTGAAAGCCGGCATGTCGGTGCAGCGTGCCATCCACGAAGGCTTCAATCGTGCGTACACCGCGATCATCGAC GCCAACCTGACCAGCCTGCTGGTCGGCGGTATCCTGTTCGCCATGGGTACCGGCCCGGTCAAAGGCTTTGCGGTTACCAT GTCCCTCGGGATTTTCACCTCGATGTTCACCGCCGTCATGGTGACCCGCGCAATGGTCAACCTGACCTGCGGCGGGCGTG ACATCAAGAAGCTGTGGGTTTGA Protein sequence : MLNKYPLWKYALIVLVLVVGFIYSAPNLYPDDPAVQISGASSALQVNQADLDRVSKALVDAKIAVKGASLGEKGSGLIRL TNQEDQLPAKDVVRKALGDDYVVALNLAQTTPQWLRNLGASPMKLGLDLSGGVHFLLEVDMDKAMTARMKVYEGEVKTLL RKERVRYRSLPQQDGGIMLGFADDATREQARALIRKNFNDFDLTTTDRNELAVLRLALTQAKVAEIREYSIKQNLTTVRN RVNELGVAEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRFGAEPGASKATTEVFEFREGGRSAAVERGLIITG DQVTDAQASFDEHGRPQVNIRLDGHGGELMSRATRSNVGRSMAVIFIEQKPVTRYVKQTVGGVEKDVAVQSFVEEKKIIS LATIQSPLGSQFRITGLNGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNITKGIDASLWGMLFVSLFIIAIYRG FGVIATIALAGNMVLLLALMSLLGATLTLPGIAGIVLTMGMAVDANVLIFSRIREELKAGMSVQRAIHEGFNRAYTAIID ANLTSLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFTAVMVTRAMVNLTCGGRDIKKLWV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 86 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 85 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 85 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 85 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 85 |
