Gene Information

Name : T1E_4602 (T1E_4602)
Accession : YP_006535223.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5034160 - 5034687 bp
Length : 528 bp
Strand : +
Note : -

DNA sequence : 
ATGCCCGTAGCCGACTCACCGAGCCCGTACCCGCTTGAACAGCTGTACAGCGAGCACCATGGCTGGCTTTTCAGCTGGCT
ACGTCGCAAGCTGCGTTGTTCGCACAGCGCAGCCGATCTGGCCCAGGACACCTTCGTGCGCATTCTGGCCTCGCGTGATG
CCTTGCTGGGCATGCGCGAGCCACGCGCCTACCTCAGTACCACTGCACGCCGTCTGTTGATCGACCGGGTGCGCCGACAG
CAAATCGAAGAGGCCTACCTCAGCGAACTTGCCTTGGCTGCCGAGGTGCTGGAGGGGCACCAGTCTCCCGAAAGCATCCT
CATCACCCTCGAAGCGCTGGAGCAGATCGCTTTTCTGCTGGAAGGCCTGCACGTGAATGCCCGCGAGGCCTTCGTCGGTT
ACTACCTGGACGACCTGACCCAGCCTCAGATTGCCAAACGCCTGCAGATTTCCCCACGCATGGTGCGCAAGTACCTGGCT
CAGGCCCTGATCCATTGCCACCGCACGCTGGACATTGCCGAACCGTGA

Protein sequence : 
MPVADSPSPYPLEQLYSEHHGWLFSWLRRKLRCSHSAADLAQDTFVRILASRDALLGMREPRAYLSTTARRLLIDRVRRQ
QIEEAYLSELALAAEVLEGHQSPESILITLEALEQIAFLLEGLHVNAREAFVGYYLDDLTQPQIAKRLQISPRMVRKYLA
QALIHCHRTLDIAEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 4e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
T1E_4602 YP_006535223.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 2e-24 41