Gene Information

Name : T1E_4613 (T1E_4613)
Accession : YP_006535234.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5044962 - 5045855 bp
Length : 894 bp
Strand : -
Note : -

DNA sequence :
GTGAAAGACGTCATCGCCCGCAAGTACCGCCTGGTGGTGAAGACCATCGGCTATATCGGTTGGTCGCTGTTCTGGCTGCT
GATCTGGGATGTGCTGGTCACCATCGATTTCATGCTGTTCTTGAACAGCAAGTTCACCCTGCCACTGATCCCGCTGACCC
TGCTGGGCTCAGCCTTGGTGGTACTGGTAAGTTTTCGCAACAGCAGCGCCTACAACCGCTGGTGGGAGGCTCGCACCCTG
TGGGGCGCGCTGGTGAACAGTTCGCGCAGCTTCGCCCGGCAGACGCTGACGCTGATCGATGACCCGGATGACGGCCTGAA
CCCGGTCAAGGCCACCCTGCTGCGCCGGCATATCGCCTATGTGAACTGCCTGGCGGCGCACTTGAAAGGCGAAAGCTGCC
CGGAGGAGTTGATGGCCTTCATCCCCCCGGCGGAGTTCGAACGGCGCAACCGCTCGAACAATTTCGCCAATGACATTCTC
GGCGGCTCGGCAGCCTTGCTGGCGCGGGAATACCAGGCCGGGCGGCTGGACAGCATTCGTCTGGCGCGGCTGGAGTCGAC
GCTGGTAGACCTGTCTAACGCCCAGGGCGGCATGGAGCGGATTGCCAATACGCCATTGCCCTACCCCTATGTGTATTTCC
CACGGCTGTTCATCACCCTGTTCTGCCTGATCGTGCCGGTGGGGCTGGTGGAATCGCTGGGCTGGTTCACGCCGCTGGCG
TCGACGGTGGTAGGGTTCATGTTGCTGGCCATCGAGCGGATCGGCACGGACTTGCAGAGCCCGTTCAGGTTCAGCGAGCA
TCAGATCCAGATGGATACCATATGCGAGACGATCGAGCGTAACCTGGAGTCGATGCAGCGGGAGGCGCAGTGTGCCGAGG
CTGTAGACGCCTGA

Protein sequence :
MKDVIARKYRLVVKTIGYIGWSLFWLLIWDVLVTIDFMLFLNSKFTLPLIPLTLLGSALVVLVSFRNSSAYNRWWEARTL
WGALVNSSRSFARQTLTLIDDPDDGLNPVKATLLRRHIAYVNCLAAHLKGESCPEELMAFIPPAEFERRNRSNNFANDIL
GGSAALLAREYQAGRLDSIRLARLESTLVDLSNAQGGMERIANTPLPYPYVYFPRLFITLFCLIVPVGLVESLGWFTPLA
STVVGFMLLAIERIGTDLQSPFRFSEHQIQMDTICETIERNLESMQREAQCAEAVDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PSPTO_1371 NP_791198.1 effector locus protein Not tested Hrp PAI Protein 4e-87 64
unnamed AAF71505.1 unknown Not tested Hrp PAI Protein 1e-87 64
unnamed AAT96112.1 Pspto1371-like protein Not tested T-PAI Protein 8e-80 63
unnamed AAT96051.1 Pspto1371-like protein Not tested T-PAI Protein 2e-79 63
unnamed AAT96095.1 Pspto1371-like protein Not tested T-PAI Protein 2e-79 63
unnamed AAT96170.1 Pspto1371-like protein Not tested T-PAI Protein 4e-80 62
unnamed AAT96224.1 Pspto1371-like protein Not tested T-PAI Protein 3e-80 62