Gene Information

Name : T1E_0481 (T1E_0481)
Accession : YP_006531131.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 548432 - 548947 bp
Length : 516 bp
Strand : +
Note : -

DNA sequence : 
ATGCAGATCAACGACACGCTCAAGCCCACCGAGGTCGCTCTGCTCTACCAGTCTCACCATGCCTGGTTGCGTGGTTGGTT
ACGCAGCCGGGTCGGTTGCAGTGAACATGCCGCAGACCTGGCCCAGGATACCTTCGTGCGGTTGTTGCGCGCCCGCCACG
TGTCGCCGCTCAAAGAACCGCGCGCCTACCTCAGCAGCATCGCCCGTGGTTTGATGATCGACCAGTTCCGCCGCCGCGCG
CTGGAGCGGGCCTACCAGGAGAGCCTGGCTCACCTGCCCGAAGCAGAAGTGCCCAGCGAAGAGGATAAGCTTGTCATCCT
CGATAGCCTGGAACGCCTCGACCGCGCCTTGCACCAGTTGAAACCGCGCGTCCGCCAAGCGTTCCTGCTGGCCCAGCTAG
ACGGTTTGAGCATCGTGCAGGTTGCCCAACGTCTGGAGGTGTCCAGGGCCACCGTCGAGCGCGATCTGGCCAAGGCCCTG
GGCGTCTGCTACCGGTTGCGCTATGCCGATGCCTGA

Protein sequence : 
MQINDTLKPTEVALLYQSHHAWLRGWLRSRVGCSEHAADLAQDTFVRLLRARHVSPLKEPRAYLSSIARGLMIDQFRRRA
LERAYQESLAHLPEAEVPSEEDKLVILDSLERLDRALHQLKPRVRQAFLLAQLDGLSIVQVAQRLEVSRATVERDLAKAL
GVCYRLRYADA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 2e-33 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
T1E_0481 YP_006531131.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 6e-34 44