Gene Information

Name : fecI (T1E_0066)
Accession : YP_006530716.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 71540 - 72040 bp
Length : 501 bp
Strand : -
Note : -

DNA sequence : 
ATGGCAACGCTCGATCCCCAGGCCCTGCACGAGCTGTACAGCGAAAACAACAGCTGGCTGAAGGGCTGGCTGCGCGCCCG
CCTGGGCAACGCCGCCGACGCTTCCGACCTGGCGCACGACACGTTCTTGCGGGTAATGACCGCGCGTAACCCGTTGCCGA
TCCGTGAGCCGCGCAGCTACCTCAGCGCTATCGCCCGCGCCCTTCTGATAGACAAAGCTCGCCGTCGCATCATCGAAAAA
GCTTACCTGCAGGCGCTGGCCCTGCGTCCGGAACCGGTAGAGGTGTCGCCGGAGGTGCGCTTGTCCATCATAGAGATGCT
GGTGGCCGTGGACAGCCTGCTCGACGAACTCGGCGCCAAGACCCGCGCCATCTTCCTTGCCGTTCAACTCGAAGGCCTGA
CCTACGGCGCTGCGGCCGAGCGCTTCGGCGTGTCGATCACCACCGTGAAGAATCACCTGATCAAGGCCATGACTCGCTGC
CTGCTGGCAGTCGAAGGCTGA

Protein sequence : 
MATLDPQALHELYSENNSWLKGWLRARLGNAADASDLAHDTFLRVMTARNPLPIREPRSYLSAIARALLIDKARRRIIEK
AYLQALALRPEPVEVSPEVRLSIIEMLVAVDSLLDELGAKTRAIFLAVQLEGLTYGAAAERFGVSITTVKNHLIKAMTRC
LLAVEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 9e-35 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecI YP_006530716.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 4e-35 50