Gene Information

Name : EFD32_2836 (EFD32_2836)
Accession : YP_006539193.1
Strain : Enterococcus faecalis D32
Genome accession: NC_018221
Putative virulence/resistance : Virulence
Product : clpC ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2920310 - 2922805 bp
Length : 2496 bp
Strand : -
Note : -

DNA sequence :
ATGGATGAACTATTTACAGAAAGTGCGAAAGCCGTACTGGCGATTGCCCAAGAAGAAGCGAAGTATTTTCGTCACCAATC
CGTCGGTTCTGAGCATTTATTATTAGCACTCGTTTTAGAACCGAATGGGATTGCCGGAAAAACATTACGACAATTGAATA
CTGACACAGAAGACATCCGTGAAGAAATTGAGCATTTAAGTGGCTATGGCACCATGCAAAGTCCAATGGGGAATAACAAC
TTATACTTGCCTTATTCACCAAGAGCCAAACAAATCTTTGCCTATGCTGGAGATGAAGCGAAACGCTTAGGGGCTCAAAA
GATTGGTACCGAGCATTTATTATTAGGCTTGTTAAGAGACGAAGAAATTTTAGCGTCTAGAATTTTAGTGAATTTGGGAT
TAAGCTTATCCAAAATGCGTCAATTATTATTGAAAAAAATGGGCGTTTCCGAACCCAATGGCGCACAACGTCGTCGGAAT
GGTCAAAGTAAAAATGCGCCACAAGGGACGCCAACATTGGATTCTTTAGCAAGAGATTTAACCAAGTTAGCACGAGAACA
AAGCTTGGATCCAGTAGTTGGTCGCGGTACCGAAGTCCGTCGTTTGATCCAAATTTTGAGTCGCCGTACCAAAAACAATC
CTGTCTTAGTCGGTGAACCAGGTGTTGGGAAAACAGCGATAGCAGAAGGGTTAGCCCAGAAAATTGTCAACCGGGAAGTC
CCTGAAGATATGCAAGGCAAACGTTTAATGATGCTAGACATGGGTGCCTTGGTTGCTGGAACCAAATATCGAGGTGAGTT
CGAAGATCGCTTGAAAAAAGTTGTCGATGAAATCTATCAAGATGGACAAGTCATTTTATTTATCGACGAATTGCATACCT
TGATCGGTGCTGGCGGTGCAGAAGGGGCGATTGATGCTTCAAATATTTTAAAACCTGCTTTAGCACGTGGCGAGTTGCAA
ACAATTGGTGCGACAACTCTGGATGAATACCAAAAATATATTGAAAAAGATGCCGCTTTGGAACGTCGTTTTGCCCGTAT
TCAAGTAGCAGAACCAACCCCAGAAGAAGCAGAAGAAATTCTAAAAGGCTTGCGTTCCCGCTATGAAAAACATCATGGCG
TAGAAATTACAGATGAAGCTCTACATGCAGCGGTTCAATTATCGATTCGCTATTTAAATGACCGCCAATTACCAGATAAA
GCAATTGATTTAATGGACGAATCTGCAGCAAAAGTTCGTTTAGATAAGGCAGATCAACCTTCAGAAATTAATGAATTGCG
TACCGAAATTTCTCAATTAATTACGGAAAAAGAAGAGGCCATTCAAAATCAATCATTTGAAAGTGCTGCTCGGATTCGTC
AAAAAGAAAAACAAGTGATGGAAAAACTAGAAGAATTGATTGCAGTGAAAGAAAAAAGTCTGTCTGGTTACAGTACGCAA
GTAACAGAAGAAGACGTGGCTGGAGTCGTTTCACAATGGACAGGCGTTCCTTTGCAGCAGCTAGAGAAGAAAGAAAGCGA
ACGATTGATGGAATTAGAAACCATTTTACATCAACGGGTCGTTGGCCAAAACGAAGCAGTTGAAGCTGTTTCACGCGCTA
TCCGTCGTGCGCGTAGTGGCTTGAAAGACCCAGCAAGACCGATTGGTTCCTTCATGTTCTTAGGACCAACTGGGGTTGGG
AAAACAGAACTTGCCAAAGCCTTAGCCGAAGCGATGTTTGGCAGCGAAGAAGCCTTGATTCGCGTGGACATGTCTGAGTT
TATGGAAAAATACAGTACTAGCCGTTTAATCGGTTCTCCTCCAGGTTATGTCGGCTACGAAGAAGGCGGCCAACTAACTG
AAAAAATTCGTCAACGTCCTTATTCCGTTATTTTGCTAGATGAAGTAGAAAAAGCCCATCCAGATGTCTTTAATATTTTA
TTACAAGTCTTAGATGATGGCCATTTAACGGATGCCAAAGGACGAAAAGTCGATTTTCGTAACACGATTTTAATCATGAC
CTCCAACTTAGGAGCAACAGCGATTCGTGAAGAAAAACATGTCGGCTTCAATGTGAAAGACATTTCTAAAAATCATGAAT
TAATGCAAAAACGAATCATGGAAGAATTGAAAAAAGCCTTCCGTCCAGAATTCTTAAACCGAATTGATGAAACGGTTGTC
TTCCATTCCTTGAAACAAGAGGAAATTCATGAAATCGTAAAAATTATGAGTCAATCTGTCGTGAAACGGATGGCCGAACA
AGAGGTTAAAGTGAAAATCACACCAGCTGCAATTGAAGTTATTGGTAAAGTCGGGTTTGATCCAGAATATGGCGCACGTC
CAATTCGTCGGGCCTTGCAAAAAGAAGTGGAAGATCGTTTAAGTGAAGCCCTTCTTTCCGGTCAAATTCAGTTAGGGGAT
AAAGTAACCTTAGGTGCTAGCAAAGGCAAAATTACGTTAAATGTGCGGGCACCAAAAGCACCAAAAACAGAAGCGAAAGA
ATTACAAACTGTATAG

Protein sequence :
MDELFTESAKAVLAIAQEEAKYFRHQSVGSEHLLLALVLEPNGIAGKTLRQLNTDTEDIREEIEHLSGYGTMQSPMGNNN
LYLPYSPRAKQIFAYAGDEAKRLGAQKIGTEHLLLGLLRDEEILASRILVNLGLSLSKMRQLLLKKMGVSEPNGAQRRRN
GQSKNAPQGTPTLDSLARDLTKLAREQSLDPVVGRGTEVRRLIQILSRRTKNNPVLVGEPGVGKTAIAEGLAQKIVNREV
PEDMQGKRLMMLDMGALVAGTKYRGEFEDRLKKVVDEIYQDGQVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQ
TIGATTLDEYQKYIEKDAALERRFARIQVAEPTPEEAEEILKGLRSRYEKHHGVEITDEALHAAVQLSIRYLNDRQLPDK
AIDLMDESAAKVRLDKADQPSEINELRTEISQLITEKEEAIQNQSFESAARIRQKEKQVMEKLEELIAVKEKSLSGYSTQ
VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRVVGQNEAVEAVSRAIRRARSGLKDPARPIGSFMFLGPTGVG
KTELAKALAEAMFGSEEALIRVDMSEFMEKYSTSRLIGSPPGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNIL
LQVLDDGHLTDAKGRKVDFRNTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFLNRIDETVV
FHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGARPIRRALQKEVEDRLSEALLSGQIQLGD
KVTLGASKGKITLNVRAPKAPKTEAKELQTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 51
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-97 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EFD32_2836 YP_006539193.1 clpC ATPase VFG0079 Protein 0.0 61
EFD32_2836 YP_006539193.1 clpC ATPase VFG0080 Protein 5e-150 49
EFD32_2836 YP_006539193.1 clpC ATPase VFG2084 Protein 8e-98 41