Gene Information

Name : ccmF (PGA1_c17010)
Accession : YP_006573121.1
Strain : Phaeobacter gallaeciensis DSM 17395
Genome accession: NC_018290
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein CcmF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1776721 - 1778685 bp
Length : 1965 bp
Strand : -
Note : -

DNA sequence :
ATGATTACAGAACTCGGTCACTTCGCCCTCATCCTCGCATTTGTGATTACCATCGTGCAGATGGTGGTGCCGCTGGTCGG
CGCCCATTTCCGCTGGCCCGGCTGGATGTCAGTTGCGGAACCTGCGGCACAGGCGCAGTTTTTCTTTACCGGCTTCGCCT
TCATGGCGTTGATGTGGGCGTTCATCACCTCCGACTTCTCGCTGCGGCTGGTGGCGCTGAACAGTCATTCCGCCAAGCCG
ATGCTTTACAAAATCTCAGGCACCTGGGGCAATCACGAAGGCTCGATGCTCTTGTGGGTGCTGATTGTCAGCCTGTTCGG
GGCGGTTGCATCGGTGTTTGGGGGCGGACTGCCACCGACGCTAAAGGCACGGGTGCTGGCAGTGCAGGCCTCTATCGGGG
TGGCGTTTTTTGCCTTCATCCTGTTTACCTCCAACCCGTTTCTGCGTCTTGCGGTGCCGCCGTTTGACGGGCAGGGGCTC
AACCCACTGTTGCAGGATCCGGGCCTCGCGTTTCATCCGCCATTTCTCTACCTCGGCTATGTCGGGTTGAGCATGGCGTT
TTCCTTTGCGGTGGCGGCCCTGATTGAAGGCCGTGTCGATGCGGCCTGGGGGCGCTGGGTGCGGCCCTGGACGTTGGCGG
CCTGGATCTTCCTCACCATCGGCATCGCGCTGGGGTCCTGGTGGGCCTACTACGAGTTGGGCTGGGGCGGGTTCTGGTTC
TGGGATCCGGTTGAAAACGCCTCCTTCATGCCGTGGTTGCTGGCGGCGGCGCTGCTGCATTCCGCCATCGTCGTGGAAAA
ACGCGAAGCGTTGAAAAGCTGGACCATCCTGCTGGCGATCCTTGCCTTTGGTTTCTCCCTGATCGGCACATTTATCGTGC
GCTCCGGGCTATTGACCTCGGTTCATGCCTTTGCCAGCGACCCGGAGCGGGGCGTGTTTATCCTGTATATTCTGGCGTTT
TTCACCGGTGGCGCGCTGCTGTTGTTTGCGCTGCGCGCACAGGCGATGCAGGCCAAGGGTGTCTTTGGTCTGGTGAGCCG
CGAAACCGCGCTGGTGGCCAATAACATCCTTTTGGCGGTGAGCTGCTTTGTCGTCTTCTTCGGCACGCTGTGGCCGGTGG
TGGCTGAAATGGCCTTTGACCGCAAGCTGAGCGTCGGGCCGCCGTTCTTCAACGCGGCCTTCACCCCTTTCATGGTGGTG
CTGGGTGCGATCCTGCCGGTGGGCGCGATGCTGCCGTGGAAACGCGGCCTACTGGGACGCACGGCCTGGCGGTTGCGCTT
TGTCTTTGCCCTGGCTGTTGCTCTTGGCGTTCTGGCCTGGGCGATGCAGACCGGCCGGTCTGGTCTGGGGCCGATTGGGC
TGTTTATTGGCGTCTGGGTGGTTGTCGGGGCTTTTGCCGACCTCTGGCTGCGGGGCAGCGCGACCGGGCGCTGGCAGCGT
CTGCTGCGCCTGCCGCGCGCCGACTGGGGCAAGGCGCTGGCCCACGCGGGGTTAGGCGTCACGATCTTTGCCATTGCCGG
GCTGACCGCCTGGCAGGATGAGGATATTCGGATTGCCGAGGTAAACCGGCCCTTCAACGTCGGGGCCTATACGCTGGAAT
TGCAGAATGTGCGCCGTGTGCAAGGGCCCAACTACCTCAGCACGATGGCGGATATCGAAGTGACCCGTGCTGGTCGGTTT
GTGGCGCTGCTGAACCCGGAAAAGCGGGATTACCCGGTCTCGCGCATGCCCACCACCGAAGCCGCAATCGACTACCGGTT
CCTGCGGGATCTTTATGTGGTGATCGGCGACCAGCAGGCGAATGGCGGCTGGACGGTGCGGACCTATATCAAACCGCTGG
CCAACTGGATCTGGGGCGGTTGCCTTCTCATGTCGCTTGGCGGCCTGCTGAGCCTGACAGATCGGCGATTCCGCGTTGCG
GCCGGCGCGCGCCGTCGCCCGCGTGAAGGAGTGCCAGCGGAATGA

Protein sequence :
MITELGHFALILAFVITIVQMVVPLVGAHFRWPGWMSVAEPAAQAQFFFTGFAFMALMWAFITSDFSLRLVALNSHSAKP
MLYKISGTWGNHEGSMLLWVLIVSLFGAVASVFGGGLPPTLKARVLAVQASIGVAFFAFILFTSNPFLRLAVPPFDGQGL
NPLLQDPGLAFHPPFLYLGYVGLSMAFSFAVAALIEGRVDAAWGRWVRPWTLAAWIFLTIGIALGSWWAYYELGWGGFWF
WDPVENASFMPWLLAAALLHSAIVVEKREALKSWTILLAILAFGFSLIGTFIVRSGLLTSVHAFASDPERGVFILYILAF
FTGGALLLFALRAQAMQAKGVFGLVSRETALVANNILLAVSCFVVFFGTLWPVVAEMAFDRKLSVGPPFFNAAFTPFMVV
LGAILPVGAMLPWKRGLLGRTAWRLRFVFALAVALGVLAWAMQTGRSGLGPIGLFIGVWVVVGAFADLWLRGSATGRWQR
LLRLPRADWGKALAHAGLGVTIFAIAGLTAWQDEDIRIAEVNRPFNVGAYTLELQNVRRVQGPNYLSTMADIEVTRAGRF
VALLNPEKRDYPVSRMPTTEAAIDYRFLRDLYVVIGDQQANGGWTVRTYIKPLANWIWGGCLLMSLGGLLSLTDRRFRVA
AGARRRPREGVPAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 2e-97 48
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 2e-105 47