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Name : clpB (PGA1_c32440) Accession : YP_006574602.1 Strain : Phaeobacter gallaeciensis DSM 17395 Genome accession: NC_018290 Putative virulence/resistance : Virulence Product : chaperone protein ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 3399959 - 3402658 bp Length : 2700 bp Strand : - Note : - DNA sequence : TTGAACCTGAAGGCCCTGAACGGGACGTGCTGCAAAGCGGGCGTCGCCACCAAAACGGGGCGCTTATATAAGGAGAGCAA GATGGACTTGAACAAGTTCACAGAACGGGCGCGCGGTTTTGTGCAGGCGGCCCAGACGATTGCACGACGTGAGGATCACC AGCGACTGATGCCTGAGCATTTGCTGAAGGCGCTGATGGATGACGACCAAGGACTGGCGAGCAATCTGATCACTCGCGCT GGTGGAACGCCGGAACAGGTGGTTCAGGCGCTGGAGTTGGCGGTGTCCAAACTGCCCAGGGTGCAGGGCAATTCTGCTGA TATCTATCTGGATGGCCAGACCGCCAAGGTGCTCGACGAGGCGGCTAAGATTGCTGAGAAGGCCGGTGACAGTTTCGTGC CGGTTGAGCGGCTGCTGATGGCGCTATGTATGGTCAAGTCCAAGGCCAAGGATGCGCTGGCGGATGGCAATGTCTCCGCG CAGGCGTTGAACGAGGCGGTCAATGATATCCGTAAGGGTCGCAAGGCGGACAGTGCCAGCGCCGAAGATGGCTATGACGC TCTGAAGAAATACGCCCGCGATCTGACGGAGGCGGTACGGGACGGCAAGATTGATCCGATCATTGGCCGGGATGAGGAAA TCCGCCGGGCGATGCAGGTGCTGAGCCGCCGGACCAAGAACAATCCGGTGCTGATTGGCGAGCCGGGGGTTGGTAAGACT GCAATCGCCGAGGGCATGGCCCTGCGTATCGTCAATGGCGATGTCCCTGAATCTCTACGCGACAAGCAGTTGCTTTCGCT CGATATGGGCGCGTTGATCGCGGGTGCCAAATACCGCGGAGAATTCGAGGAACGCCTGAAGGCGGTTCTGACCGAGGTGA CGGAGGCCGCTGGCGAAATCATTCTGTTCATCGATGAGATGCACACGCTGGTTGGTGCGGGGAAATCGGATGGCGCGATG GATGCGGCGAACCTGATTAAGCCTGCGCTCGCACGGGGTGAGTTGCATTGTATTGGCGCCACGACGCTGGACGAATACCG CAAATATGTCGAAAAAGACGCTGCTTTGGCGCGCCGGTTCCAGCCTGTGATGGTGACCGAGCCGACGGTTGAGGACACCA TTTCGATCCTCCGCGGCATCAAGGAGAAGTACGAATTGCACCACGGTGTTCGTATTGCGGATGCGGCGCTGGTGTCTGCG GCGACGCTTTCCCATCGCTATATCACTGATCGGTTCCTTCCGGACAAGGCGATTGACCTTATGGATGAGGCTGCGGCGCG CCTGCGGATGCAGGTCGACAGCAAGCCCGAAGAGCTGGATGCGCTCGACCGGCAGATTCTGCAGATGCAGATTGAGGAAG AGGCGCTGAAGCTTGAGGATGATGCGGCATCAAAAGACCGCTTGGAGACGCTGCAGAAAGAACTGGCAGAGCTGCAGGAG AAATCGGCGGAAATGACCGCGCAGTGGCAGTCCGAACGCGACAAATTGGCCTCTGCCCGTGGGCTGAAGGAACAGCTGGA CCGCGCCCGCGCCGATCTGGATGCGGCTAAACGAGAGGGCAACCTCGCCCGCGCGGGGGAGCTGTCCTATGGTGTCATCC CCGGGCTGGAAAAACAGCTGAGTGAGGCGGAAGCCTCTGAACGCAATGGGCTAATGGTTGAAGAGGCCGTACGCCCCGAG CAAATCGCCGGCGTTGTCGAACGCTGGACCGGTATCCCCACCTCCAAGATGTTGGAAGGGGAGCGTGAGAAACTGCTGCG GATGGAGGCTGACCTGCACGGTCGGGTGATTGGTCAGGATGCGGCTGTGACCGCTGTGTCCAACGCCGTGCGCCGCGCCC GTGCGGGCCTGAATGATGAAAATCGGCCCCTGGGATCGTTCCTGTTCCTAGGCCCAACCGGCGTTGGTAAGACTGAGCTG ACCAAAGCCGTCGCTGATTTCCTGTTTGACGACGACAGCGCCATGGTGCGTGTGGACATGTCGGAATTCATGGAAAAACA CGCGGTTGCTCGGCTGATCGGCGCGCCTCCGGGCTATGTCGGCTATGATGAGGGAGGCGTGCTGACCGAAGCGGTGCGGC GCAAACCCTATCAGGTGATTCTCTTTGATGAGGTTGAAAAGGCCCATCCGGATGTCTTCAACGTGTTGTTGCAGGTCTTG GATGATGGTGTGCTCACCGATGGGCAGGGGCGGACCGTCGATTTCAAGCAGACGCTGATCATTCTGACGTCGAACCTCGG CGCGCAGGCGCTGAGCCAGCTGCCGGATGGGGCCGATGCCGCCGACGCCAAGCGTGACGTGATGGATGCCGTGCGTGCCC ATTTCCGCCCAGAGTTCCTGAACCGGCTGGATGAGACGATCATTTTTGATCGGCTGGGTCGCAAGGATATGGATGGAATC GTCACGTTGCAGTTGGCGCGGCTGGAGAAACGCCTTGTGGGCCGCAAGATCACGCTTGAGTTGGATGATGGCGCGAAGAC ATGGCTCGCAGATGAGGGGTATGACCCGGTGTTCGGTGCTCGTCCGCTGAAGCGAGTCATCCAGAGAGTGTTGCAGAACC CATTGGCGGAGATGCTGCTGGCGGGAGAAATACGCGACGGGGACACGGTGCCTGTCAGTGCTGGCGCTGAGGGCCTGATC ATCGGGGATCGTATTGGCACCAGCGATCGCCCGCGCCCTGACGACGCCGTTGTCCACTAA Protein sequence : MNLKALNGTCCKAGVATKTGRLYKESKMDLNKFTERARGFVQAAQTIARREDHQRLMPEHLLKALMDDDQGLASNLITRA GGTPEQVVQALELAVSKLPRVQGNSADIYLDGQTAKVLDEAAKIAEKAGDSFVPVERLLMALCMVKSKAKDALADGNVSA QALNEAVNDIRKGRKADSASAEDGYDALKKYARDLTEAVRDGKIDPIIGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKT AIAEGMALRIVNGDVPESLRDKQLLSLDMGALIAGAKYRGEFEERLKAVLTEVTEAAGEIILFIDEMHTLVGAGKSDGAM DAANLIKPALARGELHCIGATTLDEYRKYVEKDAALARRFQPVMVTEPTVEDTISILRGIKEKYELHHGVRIADAALVSA ATLSHRYITDRFLPDKAIDLMDEAAARLRMQVDSKPEELDALDRQILQMQIEEEALKLEDDAASKDRLETLQKELAELQE KSAEMTAQWQSERDKLASARGLKEQLDRARADLDAAKREGNLARAGELSYGVIPGLEKQLSEAEASERNGLMVEEAVRPE QIAGVVERWTGIPTSKMLEGEREKLLRMEADLHGRVIGQDAAVTAVSNAVRRARAGLNDENRPLGSFLFLGPTGVGKTEL TKAVADFLFDDDSAMVRVDMSEFMEKHAVARLIGAPPGYVGYDEGGVLTEAVRRKPYQVILFDEVEKAHPDVFNVLLQVL DDGVLTDGQGRTVDFKQTLIILTSNLGAQALSQLPDGADAADAKRDVMDAVRAHFRPEFLNRLDETIIFDRLGRKDMDGI VTLQLARLEKRLVGRKITLELDDGAKTWLADEGYDPVFGARPLKRVIQRVLQNPLAEMLLAGEIRDGDTVPVSAGAEGLI IGDRIGTSDRPRPDDAVVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-107 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-107 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 9e-108 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_006574602.1 | chaperone protein ClpB | VFG2076 | Protein | 2e-120 | 44 |
| clpB | YP_006574602.1 | chaperone protein ClpB | VFG2084 | Protein | 6e-110 | 42 |
