Gene Information

Name : A359_00770 (A359_00770)
Accession : YP_006587909.1
Strain : secondary endosymbiont of Ctenarytaina eucalypti
Genome accession: NC_018419
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 122522 - 125095 bp
Length : 2574 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB

DNA sequence :
ATGCCTCTGGAGCGTCTTACCAATAAATTCCAGCTTGCTCTCGCTGAGTCGCAGTCTATAGCACGTAGGCGCGGTAATCA
AGTCATAGAACCTTTACACGTGATCGCAGCATTACTGAAGAAAGAATCCTACATCTGGCAGCCGCTTCTAGAAGCGGCTG
GCGTCAATGTTCTGGCGTTTATTAGTGCGGTGGAGCATGCCTGCGATCGTCTGCCTCAATGCAAGGTAACCGGAGTCGAC
ATACAGCCTTCGCAAGCCCTCCTGCACCTGCTAAACCAGTGCGACAAGCTGGCGAAAAAACGTGCCGAGCCTTTCATCTC
ATCTGAGCTTTTTCTTCTAGCCTTGTTGAAATCAAGAGGCACGCTAGCTGAGCTTTTAAAGTCGGCCGGAACCACTAGTG
CGGTGATCGATCGGGCTATTGAAAACGTGCTCGCTGGTGAGCAAGGAAATGAGCAGGGTTTGGAAGATCGACGTCTAGCT
CTTAAAAAGTTCACTGTTGACCTGACTGCACGTGCTGCGCAAGGCAAACTTGACCCTGTCATTGGTCGCGACGAAGAAAT
TCGTCGTACTATTCAGGTGCTTCAGCGGCGCACCAAGAATAATCCTGTTCTCATCGGCGAACCAGGGGTGGGTAAAACCG
CGATCGTGGAGGGTTTGGCGCAGCGTATTGTCAATGGGGAGGTTCCAGAAGGCTTGAAAAAAAACCGAGTGTTATCCTTG
GACATGGGATCACTCGTGGCGGGCGCTAAATACCGCGGTGAATTTGAAGAGCGACTTAAAAGTGTATTGAATGATTTGTT
AAAGGAGGAAGGCAATGTCACATTGTTTATCGATGAATTGCATACTATGATTGGCGCTGGCAACGCCGAGGGTACTATAG
ACGCCTGCAACATGCTCAAACCAGCATTAGCGCGCGGTGAGCTGCATTGCATAGGGGCTACAACACTTGATGAATACCGA
AAATTTATCGAGAAAGACGCTGCGCTGGAACGACGTTTCCAGAAGGTCTTTGTTGTTGAGCCTAACGTAGAAAACACCAT
CGCTATCCTGCGCGGATTGAAAGAACGTTATGAGCTGCATCACAATGTGCAGATAACCGACCCAGCCATTGTTGCGGCTG
CGACGCTGTCCCATCGTTATATCGCAGATAGACAGCTGCCAGATAAGGCAATTGACCTTATCGATGAGGCTGCGTCTAGT
ATTCGTATACAAATAGATTCTAAGCCGGAAGAGCTAGATCGTCTCGAGCGTCGCATCATGCAACTGAAGCTAGAGCAACA
GGCGCTAAAGAAAGAATCGGATGAGGCTAGCATTAAACGGCTCGCGCTTTTGCATGATGAGTTAGCGAAAAAAGAGAGTG
ATTATTCTGCTCTTGAAGAAAAATGGAAGGCCGAAAAAGCGTCTTTATCGGGAACGCAGTATTTGAAGGCTACACTGGAA
CAGGCAAAGATTTCGATTGAGCAGGCGCGACGAGCCTGCGACCTGGCGCGGATGTCTGAATTGCAGTACGGCACAATCCC
CGAGCTAGAAAAAAAACTGGAAGCAGCGGCAACATTTAAGGAGGAAGGGTTCTGCTTACTGCGTAACCGGGTAACCGATA
TCGAGATAGCCGAAGTAGTGGCACGTTGGACGGGTATTCCCGTATCGCGGATGCTAGAAAGTGAGCGGGAAAAGCTGCTG
CGCATGGAGCAAGACTTACATCAGTGGGTTATTGGTCAGCATGAAGCCGTGGAGGCTGTGTCTAACGCCATTCGCCGCAG
TCGTGCGGGCCTTGCGGATCCTAACCGGCCGATCGGTTCTTTTATGTTTCTGGGGCCGACCGGAGTCGGTAAAACAGAGC
TATGCAAAGCACTTACTACCTTCTTGTTCGATAGCTATGACGCTATGCTGCGTATTGATATGTCTGAGTTTATGGAAAAA
CATTCGGTATCGAGATTGGTTGGTGCCCCTCCAGGCTACGTCGGCTATGAGGAAGGAGGCTATCTGACTGAAACTGTCCG
ACGTCGTCCTTATTCAGTTATTCTGCTGGATGAGATTGAAAAAGCGCATCCGGATGTATTTAATATTTTACTGCAGGTAT
TAGATGACGGACGTTTAACGGATAGTCAAGGACGTACAGTGGATTTTCGAAATACCGTCGTTATTATGACCTCCAATCTG
GGCTCGGAGCTCATTCAAGAGCGCTTCGGGCAGATGAGCTATCAGGAAATGAAGCGGATCGTGCTAGATGTTGTCAGCCA
TCATTTCCGGCCGGAGTTTCTTAATCGTGTAGATGAGATCGTTGTCTTTCATCCTCTGAGTCGAGAGGATATCAGCGATA
TTGTGCAAATTCAGTTGCAGCGTCTTTACCAGCGTCTAGAAGAGCGTGGATATAAAACTACTATCAGTGAAGAAGTGTTA
GCACTGCTTGAACAATCCGGCTTCGATCCCGTCTATGGTGCGCGGCCGCTAAAACGGACTATTCAGCAAGCAATTGAAAA
CCCATTATCCCAGCAGATCCTGTCGGGTCAGTTGTTACCGGGTAAGCCAGTGCATCTGCAGGTGCTAGATGAACATATCG
TAGCTAGACAATAA

Protein sequence :
MPLERLTNKFQLALAESQSIARRRGNQVIEPLHVIAALLKKESYIWQPLLEAAGVNVLAFISAVEHACDRLPQCKVTGVD
IQPSQALLHLLNQCDKLAKKRAEPFISSELFLLALLKSRGTLAELLKSAGTTSAVIDRAIENVLAGEQGNEQGLEDRRLA
LKKFTVDLTARAAQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKKNRVLSL
DMGSLVAGAKYRGEFEERLKSVLNDLLKEEGNVTLFIDELHTMIGAGNAEGTIDACNMLKPALARGELHCIGATTLDEYR
KFIEKDAALERRFQKVFVVEPNVENTIAILRGLKERYELHHNVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS
IRIQIDSKPEELDRLERRIMQLKLEQQALKKESDEASIKRLALLHDELAKKESDYSALEEKWKAEKASLSGTQYLKATLE
QAKISIEQARRACDLARMSELQYGTIPELEKKLEAAATFKEEGFCLLRNRVTDIEIAEVVARWTGIPVSRMLESEREKLL
RMEQDLHQWVIGQHEAVEAVSNAIRRSRAGLADPNRPIGSFMFLGPTGVGKTELCKALTTFLFDSYDAMLRIDMSEFMEK
HSVSRLVGAPPGYVGYEEGGYLTETVRRRPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVDFRNTVVIMTSNL
GSELIQERFGQMSYQEMKRIVLDVVSHHFRPEFLNRVDEIVVFHPLSREDISDIVQIQLQRLYQRLEERGYKTTISEEVL
ALLEQSGFDPVYGARPLKRTIQQAIENPLSQQILSGQLLPGKPVHLQVLDEHIVARQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 6e-103 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 1e-99 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 8e-100 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A359_00770 YP_006587909.1 ATP-dependent chaperone ClpB VFG0079 Protein 5e-127 43
A359_00770 YP_006587909.1 ATP-dependent chaperone ClpB VFG2076 Protein 1e-105 43
A359_00770 YP_006587909.1 ATP-dependent chaperone ClpB VFG2084 Protein 2e-106 41