Gene Information

Name : BN69_2499 (BN69_2499)
Accession : YP_006592601.1
Strain : Methylocystis sp. SC2
Genome accession: NC_018485
Putative virulence/resistance : Virulence
Product : toxin secretion ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2587240 - 2589429 bp
Length : 2190 bp
Strand : +
Note : -

DNA sequence :
ATGCACGACGCCGTGACGGATGAACCCGCGCCGACCGACGGAAAGCCCCATGAACAGTCGGGGCGCTATGAAGACTCCGG
TTTGCAAGGCCTTTGCGGGATCGCCGCCTATTATCGCATTGTCGCGAGCCCTGATCAGATCCGGCGGGAACTCGCGCTTC
ACGGAAAGAGCGTCAGTTGCGAAGACCTCGTGCGAGCCGCCGCTCTTATCGGACTCAAAGCGCGCGTAATTCGTCCCATA
CATAAGCAAAGGCTTGCCGCCCTCCCTTCGCCTGCGATCGTTCGAACGCGCGCTGGTCGATTTGAAGTCTTTGGCGGCAA
AATGCCGGCCGGCGATTATCGCCTCGTCGATCCGATCACGCGCTCGGATCGTAACCTTCCCTTAGATCAAATTCATGAGG
CGCTCGACGCGGTCATTCTTGTTTCTCGTAGACTCGGCGGCGCCGGCGTCGAGCCCAAGCATTTTAGTCTTCGCTGGTTT
CTTCCTTCGATTTGGCGCTATCGTCGGCCGCTGCTTCACGTCCTCGTCGCATCGTTCTTCGTGCAGATCTTTGCGCTGGT
GACGCCGCTGTTCTTCCAGGTCGTCATCGACAAGGTCCTCAGCCACAGGGGCTATGATACGCTCTTCGTTTTGATCGGCG
GATTGGCGGTTATCGGCGTTTTCGACGTTGTGCTTCAGTATTTGCGCACTTATGCGCTGTCGCATACGACCAATCGGATT
GACGTCGAACTCGGGCGCCGCCTGTTCTTTCATCTCTTCCATCTGCCGATGGCGTATTTCGAGACGCGATCCGCCGGGCA
GACGGTGGCGCGCGTAAGAGAGCTCGAGACGATTCGCGCTTTCTTGACGGGCCAGGGGCTGTTCTCGCTCTTGGACATCT
TTTTCACCATCGTCTTTCTCGCGGTTCTTTGGGCCTACTCCTGGAAACTAACCCTGATCGTCATCGCGTCGATACCGCTT
TACCTTATCGTCGCGGCGTTCATTCGGCCGATCCTCCAGGAAATGATCAAGGAGAAGTTCAACCGCGGCGCCGAGAGCCA
GCAGATGTTGGTGGAAGCGGTCGTTGGCGTGCAGACGATCAAGTCGACCGCTGTCGAGCCCTCGATGCAAACGCAATGGG
AGGAGAAGCTTGCTTCATATGTATCGAAATCATTCGATACCGGATTGCTGGGGGCGGGGGGCCAGTCGGCGATTCAATAC
ATCAGCAAGCTCACGAACGCGCTGCTGCTGCTGTTTGGCGCCAAGGCGGTTATCGACGGCGAGTTGTCTGTCGGCGAGCT
CGTCGCGTTTAACATGATTTCCGCGCAAGTCGCGCAGCCCATCTTGCGGCTCTCGCAAATCTGGCAAGATTTCCAGCAGG
TGCAGATCTCCATCGAGCGTCTGGGCGATATCCTGAATGCGCCCATGGAGCCGTTAAATCTGGCGCATGGGAGTTTGCCG
CCGGCGAAGGGCGAGATCGAGTTCAGGAACGTCACCTTCCGCTATCGGCCAGGCTCGCCCGAGATATTGAAAAACATCTC
GTTTACAATAAAGCCGGGAGAAGTCATCGGAGTGGTCGGACGCTCCGGATCAGGCAAGTCAACCCTCGCAAAATTGATTC
AGCGCTTTTATGCGCCTGAAGAGGGACAGATTCTTGTCGATGGCGCTGACATTATGCAGGTCAACCCGGCGTGGCTTCGC
TCGCAGATCGGCGTCGTGCTGCAAGAGAATCTGCTCTTCAACCGCAGTCTTCACGATAATATCGCGCTCGCCAATCCTGC
GATGTCTCGGGCTCAAGTCGTGGCCGCGGCGAGAATGTCCGGAGCGGATGAGTTCATCAGTCGGCTCGCCAATGGCTACG
ACACGATGGTGGAGGAACGGGGAAGCAATCTTTCCGGCGGACAGCGACAGAGAATCGCGATTGCGCGCGCGCTTGCGATC
AATCCTCGGATCCTCATCTTCGATGAAGCGACCAGCGCCCTGGACTACGAAAGCGAACGCATCATCCAGAAAAACATGTT
CGAGATCGTCAAGAGCCGCACTGTTATCATCATCGCTCATCGTCTGCAGGCCGTCCGGAGATGCGACAGAATCATCAGTC
TCAGCGACGGGCGCATTCAAGAGATGGGTGCGCATGATGAACTCATCCGCAATCCCAACGGTCTTTACGCTCACCTCTGG
TCTCTTCAGAACGATTTGGAAAACGTTTGA

Protein sequence :
MHDAVTDEPAPTDGKPHEQSGRYEDSGLQGLCGIAAYYRIVASPDQIRRELALHGKSVSCEDLVRAAALIGLKARVIRPI
HKQRLAALPSPAIVRTRAGRFEVFGGKMPAGDYRLVDPITRSDRNLPLDQIHEALDAVILVSRRLGGAGVEPKHFSLRWF
LPSIWRYRRPLLHVLVASFFVQIFALVTPLFFQVVIDKVLSHRGYDTLFVLIGGLAVIGVFDVVLQYLRTYALSHTTNRI
DVELGRRLFFHLFHLPMAYFETRSAGQTVARVRELETIRAFLTGQGLFSLLDIFFTIVFLAVLWAYSWKLTLIVIASIPL
YLIVAAFIRPILQEMIKEKFNRGAESQQMLVEAVVGVQTIKSTAVEPSMQTQWEEKLASYVSKSFDTGLLGAGGQSAIQY
ISKLTNALLLLFGAKAVIDGELSVGELVAFNMISAQVAQPILRLSQIWQDFQQVQISIERLGDILNAPMEPLNLAHGSLP
PAKGEIEFRNVTFRYRPGSPEILKNISFTIKPGEVIGVVGRSGSGKSTLAKLIQRFYAPEEGQILVDGADIMQVNPAWLR
SQIGVVLQENLLFNRSLHDNIALANPAMSRAQVVAAARMSGADEFISRLANGYDTMVEERGSNLSGGQRQRIAIARALAI
NPRILIFDEATSALDYESERIIQKNMFEIVKSRTVIIIAHRLQAVRRCDRIISLSDGRIQEMGAHDELIRNPNGLYAHLW
SLQNDLENV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 1e-157 51
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 7e-158 51
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 7e-158 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN69_2499 YP_006592601.1 toxin secretion ABC transporter, ATP-binding protein VFG0841 Protein 4e-150 51
BN69_2499 YP_006592601.1 toxin secretion ABC transporter, ATP-binding protein VFG1501 Protein 4e-158 51
BN69_2499 YP_006592601.1 toxin secretion ABC transporter, ATP-binding protein VFG0907 Protein 5e-158 51
BN69_2499 YP_006592601.1 toxin secretion ABC transporter, ATP-binding protein VFG1557 Protein 4e-158 51
BN69_2499 YP_006592601.1 toxin secretion ABC transporter, ATP-binding protein VFG1269 Protein 5e-135 47