Gene Information

Name : GEM_3044 (GEM_3044)
Accession : YP_006617134.1
Strain :
Genome accession: NC_018513
Putative virulence/resistance : Virulence
Product : type VI secretion system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3330305 - 3330820 bp
Length : 516 bp
Strand : -
Note : -

DNA sequence : 
ATGGCCAAGAAAGAAAGCATTCAGAAAAGCTTGCAGAAAATACGGCCGCCGCGCGTCCAGCTGACCTACGAGGTCGAGAA
GGGCGACGCGATCGAGGTGAAGGAACTGCCGTTCGTCGTCGGGGTGGTCGGCGATCTGGCGGGCCAGTCGGAAGTCGAGC
AGCCGAAGCTGCGCGATCGCAAGTTCGTCAACATCGACCGTGACAACTTCGACGACGTGATGAAGGCGATCGAGCCGCGC
GCCGCGTTCCAGGTGGAAAACCGCCTGAGCCCGGACGGCGGCAAGTTCGCCGTCGACCTGAAGTTCCGTTCGCTGTCGGA
TTTCAGCCCGGACGAAGTCGTCGAACAGGTCGAGCCGCTGCGCCGCCTGCTCGAGGCGCGCTCGAAGCTCGCCGACCTGC
GCAACAAGCTCGCCGGCAACGACAAGCTCGAGGATCTGCTGTCCGACGTGCTGAAGAACACGCAGCAGCTGCAAGAGCTC
GCGAAGGGCACGGGCGGCGACAAAGACGGCGAATGA

Protein sequence : 
MAKKESIQKSLQKIRPPRVQLTYEVEKGDAIEVKELPFVVGVVGDLAGQSEVEQPKLRDRKFVNIDRDNFDDVMKAIEPR
AAFQVENRLSPDGGKFAVDLKFRSLSDFSPDEVVEQVEPLRRLLEARSKLADLRNKLAGNDKLEDLLSDVLKNTQQLQEL
AKGTGGDKDGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 7e-28 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_3044 YP_006617134.1 type VI secretion system protein VFG2069 Protein 1e-27 43