Name : GEM_4203 (GEM_4203) Accession : YP_006618287.1 Strain : Genome accession: NC_018514 Putative virulence/resistance : Virulence Product : Rhs element Vgr protein Function : - COG functional category : - COG ID : - EC number : - Position : 1123167 - 1125371 bp Length : 2205 bp Strand : - Note : - DNA sequence : GTGAATCGCGTATTCACACTCGACAGCCCGCACGGCGACGACTTGACGTTCCACACGCTCGACGGCTGCGAGGCACTCGG CCAGTTGTTCGAATTCCGGATCGAGGCGCTCGCCGACAGTCACAGCCTGTCGCTGAAGGACCTGCTCGGCAAGCCCGTGA CGGTCCGCATCGAACAGCAGGACCTGTCGACGCGCTACCTGAACGGGATCGTCGCGCGGGCGTCGCTCGCCGGCCGGCGA GCGGAGCGGCACTACGGTTACGAGCTGGTGGTGCGGCCGTGGCTGTGGCTCGCGACGCGCCGCTCCGACTGCCGGATCTT CCAGAACCGCACCGTGCCCGACATCGTGCAGGAAGTGCTGGCGCCTTACGGTTTCCCCATCGAGAACAAGCTGACCGAAG CGTATGTGCCGCGCGAATACTGCGTGCAGTACAACGAGACCGACACTGCATTCGTGACGCGGCTGATGGAGTTCGAGGGC ATCTATTTCCATTTCAGGCACGCGGCGGACCATCACACGCTCGTGCTGAGCGACGCGATGTCGTCGCACGTCGCGTTGCC CGGTTACGAAACGATCCCGTACATCGCACCGGATCGAACCGCGATCGCCGATGAGGAACACATCGACGGCTGGCTGCCCG CGCAGGAGGTTAGCGTCGGCAAGCATCAGACCACCGACTACGACTATACGAAGCCGCGCGCCGATCTTTCATCGCAGAAG GTCGATCCGCGCGGCCACGACCACGACAGCTTCGCGTCGTTCGAATGGCCGGGCGGGTATCGCGACGATACGCCCGGTGC GCACTACAGCCGCGTGCGGCTCGAGGAGCAGCAGGCCGAGCACGAGCGTGCGAGCGCCGATACCGACGTGCGCGGCGTCG CGCCCGGTTATGTGTTCACGCTCGAGCATTGCCCGCGCGCCGATCAGAATCGCGAGTACCTGATCGTGCGGTGTCGGTAC CGTTTTCAGGAGAACGCGTATGCGAGCGACCAGGGCGCGGAGGCAGTCGTGCATCGGACCATAATGCTCGTGCAGCCGTC GAGCCTGCCTTTCCGGTCGCCCCGCGACACGCCGCGGCCGCGGACCAGCGGTCCGCAGACGGCCACCGTCGTCGGGCCGC CCGGCGAGGAGATCTGGACCGATCAGTACGGGCGCGTGAAGCTGCAGTTTCGCTGGGACCGGTATGGGCAGAGCAATCAG GATTCGTCGTGCTGGGTGCGCGTGTCGAGCCCGTGGGCCGGCGGCGGCTTCGGGGGCGTGCAGATTCCGCGGGTCGGCGA TGAGGTCGTGGTCGATTTCCTGAACGGCGATCCGGATGAGCCGATCGTCACCGGGCGCGTATTCAACGGCGAAAAGATGC CGCCGTGGGGGTTGCCGGGCAGCGCGACGCAAAGCGGGCTGCTGTCCCGGTCGTCGCCGGGCGGGACGACCGACCATGCG AACGCGTTCCGGTTCGAGGACAAGAAGGGCGCCGAGCAGCTGTGGATGCATGCGGAGCGGAATTTCGATGCGGAGACCGA ACTCGATCATTCGCTTTCCGTCGGTAACAACCATACGCATACGGTCGGCAACGACGAGACGATGCAGGTGAACCACAACC GGCAACGGAGTGTGGGGCAGAACGAGACGGTGAATATCGGCCAGCATCGCGTGGCGCAGGTCGGCGGGAACGAGACCCAT GCGGTGGCGGGAAATCGCACGCGTTCGGTCGGACAGAACGAAACCGTGACGATCTCCGCCAATCGCGACGCGACCATCGG CGGTACGCACAGCGAGACGGTCGCGAAAGGCAAGACCGAAACCATCGGCGAAGGCAAGACGCTGAACGTCGGACAGATGT ATCAGACGACGTCGCAGGACATGACGACGTTGGTTGCGTCGTCGCACACCGAGGAAATCGGTGCGAGGACGTCGACGATT GCGAAAGCGCATACGCTCACGGTCGGTGGAGAACACACCGTCAACGTTGGCGCGAACCACACGACGAACGTGCAGCATCA GGTGCTCGTCGCGGCCGGCGACCAACTGATGCTCATGTGCGGTGCATCGAGCATCCTGATGAAGCGCGACGGCACGATCG CGATCCAGGGCATCAACGTGACGTCGACCGGTACGGAAAGCCATAGCGTGAACGGCAAGACGGTGACATCGTCGGCGACG GGCGAGCACACCGTCGAAGGCACGATCCTGAAACTGAATCCATGA Protein sequence : MNRVFTLDSPHGDDLTFHTLDGCEALGQLFEFRIEALADSHSLSLKDLLGKPVTVRIEQQDLSTRYLNGIVARASLAGRR AERHYGYELVVRPWLWLATRRSDCRIFQNRTVPDIVQEVLAPYGFPIENKLTEAYVPREYCVQYNETDTAFVTRLMEFEG IYFHFRHAADHHTLVLSDAMSSHVALPGYETIPYIAPDRTAIADEEHIDGWLPAQEVSVGKHQTTDYDYTKPRADLSSQK VDPRGHDHDSFASFEWPGGYRDDTPGAHYSRVRLEEQQAEHERASADTDVRGVAPGYVFTLEHCPRADQNREYLIVRCRY RFQENAYASDQGAEAVVHRTIMLVQPSSLPFRSPRDTPRPRTSGPQTATVVGPPGEEIWTDQYGRVKLQFRWDRYGQSNQ DSSCWVRVSSPWAGGGFGGVQIPRVGDEVVVDFLNGDPDEPIVTGRVFNGEKMPPWGLPGSATQSGLLSRSSPGGTTDHA NAFRFEDKKGAEQLWMHAERNFDAETELDHSLSVGNNHTHTVGNDETMQVNHNRQRSVGQNETVNIGQHRVAQVGGNETH AVAGNRTRSVGQNETVTISANRDATIGGTHSETVAKGKTETIGEGKTLNVGQMYQTTSQDMTTLVASSHTEEIGARTSTI AKAHTLTVGGEHTVNVGANHTTNVQHQVLVAAGDQLMLMCGASSILMKRDGTIAIQGINVTSTGTESHSVNGKTVTSSAT GEHTVEGTILKLNP |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
STY0319 | NP_454896.1 | Rhs-family protein | Not tested | SPI-6 | Protein | 3e-98 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
GEM_4203 | YP_006618287.1 | Rhs element Vgr protein | VFG2077 | Protein | 6e-119 | 44 |