Gene Information

Name : GEM_4203 (GEM_4203)
Accession : YP_006618287.1
Strain :
Genome accession: NC_018514
Putative virulence/resistance : Virulence
Product : Rhs element Vgr protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1123167 - 1125371 bp
Length : 2205 bp
Strand : -
Note : -

DNA sequence :
GTGAATCGCGTATTCACACTCGACAGCCCGCACGGCGACGACTTGACGTTCCACACGCTCGACGGCTGCGAGGCACTCGG
CCAGTTGTTCGAATTCCGGATCGAGGCGCTCGCCGACAGTCACAGCCTGTCGCTGAAGGACCTGCTCGGCAAGCCCGTGA
CGGTCCGCATCGAACAGCAGGACCTGTCGACGCGCTACCTGAACGGGATCGTCGCGCGGGCGTCGCTCGCCGGCCGGCGA
GCGGAGCGGCACTACGGTTACGAGCTGGTGGTGCGGCCGTGGCTGTGGCTCGCGACGCGCCGCTCCGACTGCCGGATCTT
CCAGAACCGCACCGTGCCCGACATCGTGCAGGAAGTGCTGGCGCCTTACGGTTTCCCCATCGAGAACAAGCTGACCGAAG
CGTATGTGCCGCGCGAATACTGCGTGCAGTACAACGAGACCGACACTGCATTCGTGACGCGGCTGATGGAGTTCGAGGGC
ATCTATTTCCATTTCAGGCACGCGGCGGACCATCACACGCTCGTGCTGAGCGACGCGATGTCGTCGCACGTCGCGTTGCC
CGGTTACGAAACGATCCCGTACATCGCACCGGATCGAACCGCGATCGCCGATGAGGAACACATCGACGGCTGGCTGCCCG
CGCAGGAGGTTAGCGTCGGCAAGCATCAGACCACCGACTACGACTATACGAAGCCGCGCGCCGATCTTTCATCGCAGAAG
GTCGATCCGCGCGGCCACGACCACGACAGCTTCGCGTCGTTCGAATGGCCGGGCGGGTATCGCGACGATACGCCCGGTGC
GCACTACAGCCGCGTGCGGCTCGAGGAGCAGCAGGCCGAGCACGAGCGTGCGAGCGCCGATACCGACGTGCGCGGCGTCG
CGCCCGGTTATGTGTTCACGCTCGAGCATTGCCCGCGCGCCGATCAGAATCGCGAGTACCTGATCGTGCGGTGTCGGTAC
CGTTTTCAGGAGAACGCGTATGCGAGCGACCAGGGCGCGGAGGCAGTCGTGCATCGGACCATAATGCTCGTGCAGCCGTC
GAGCCTGCCTTTCCGGTCGCCCCGCGACACGCCGCGGCCGCGGACCAGCGGTCCGCAGACGGCCACCGTCGTCGGGCCGC
CCGGCGAGGAGATCTGGACCGATCAGTACGGGCGCGTGAAGCTGCAGTTTCGCTGGGACCGGTATGGGCAGAGCAATCAG
GATTCGTCGTGCTGGGTGCGCGTGTCGAGCCCGTGGGCCGGCGGCGGCTTCGGGGGCGTGCAGATTCCGCGGGTCGGCGA
TGAGGTCGTGGTCGATTTCCTGAACGGCGATCCGGATGAGCCGATCGTCACCGGGCGCGTATTCAACGGCGAAAAGATGC
CGCCGTGGGGGTTGCCGGGCAGCGCGACGCAAAGCGGGCTGCTGTCCCGGTCGTCGCCGGGCGGGACGACCGACCATGCG
AACGCGTTCCGGTTCGAGGACAAGAAGGGCGCCGAGCAGCTGTGGATGCATGCGGAGCGGAATTTCGATGCGGAGACCGA
ACTCGATCATTCGCTTTCCGTCGGTAACAACCATACGCATACGGTCGGCAACGACGAGACGATGCAGGTGAACCACAACC
GGCAACGGAGTGTGGGGCAGAACGAGACGGTGAATATCGGCCAGCATCGCGTGGCGCAGGTCGGCGGGAACGAGACCCAT
GCGGTGGCGGGAAATCGCACGCGTTCGGTCGGACAGAACGAAACCGTGACGATCTCCGCCAATCGCGACGCGACCATCGG
CGGTACGCACAGCGAGACGGTCGCGAAAGGCAAGACCGAAACCATCGGCGAAGGCAAGACGCTGAACGTCGGACAGATGT
ATCAGACGACGTCGCAGGACATGACGACGTTGGTTGCGTCGTCGCACACCGAGGAAATCGGTGCGAGGACGTCGACGATT
GCGAAAGCGCATACGCTCACGGTCGGTGGAGAACACACCGTCAACGTTGGCGCGAACCACACGACGAACGTGCAGCATCA
GGTGCTCGTCGCGGCCGGCGACCAACTGATGCTCATGTGCGGTGCATCGAGCATCCTGATGAAGCGCGACGGCACGATCG
CGATCCAGGGCATCAACGTGACGTCGACCGGTACGGAAAGCCATAGCGTGAACGGCAAGACGGTGACATCGTCGGCGACG
GGCGAGCACACCGTCGAAGGCACGATCCTGAAACTGAATCCATGA

Protein sequence :
MNRVFTLDSPHGDDLTFHTLDGCEALGQLFEFRIEALADSHSLSLKDLLGKPVTVRIEQQDLSTRYLNGIVARASLAGRR
AERHYGYELVVRPWLWLATRRSDCRIFQNRTVPDIVQEVLAPYGFPIENKLTEAYVPREYCVQYNETDTAFVTRLMEFEG
IYFHFRHAADHHTLVLSDAMSSHVALPGYETIPYIAPDRTAIADEEHIDGWLPAQEVSVGKHQTTDYDYTKPRADLSSQK
VDPRGHDHDSFASFEWPGGYRDDTPGAHYSRVRLEEQQAEHERASADTDVRGVAPGYVFTLEHCPRADQNREYLIVRCRY
RFQENAYASDQGAEAVVHRTIMLVQPSSLPFRSPRDTPRPRTSGPQTATVVGPPGEEIWTDQYGRVKLQFRWDRYGQSNQ
DSSCWVRVSSPWAGGGFGGVQIPRVGDEVVVDFLNGDPDEPIVTGRVFNGEKMPPWGLPGSATQSGLLSRSSPGGTTDHA
NAFRFEDKKGAEQLWMHAERNFDAETELDHSLSVGNNHTHTVGNDETMQVNHNRQRSVGQNETVNIGQHRVAQVGGNETH
AVAGNRTRSVGQNETVTISANRDATIGGTHSETVAKGKTETIGEGKTLNVGQMYQTTSQDMTTLVASSHTEEIGARTSTI
AKAHTLTVGGEHTVNVGANHTTNVQHQVLVAAGDQLMLMCGASSILMKRDGTIAIQGINVTSTGTESHSVNGKTVTSSAT
GEHTVEGTILKLNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0319 NP_454896.1 Rhs-family protein Not tested SPI-6 Protein 3e-98 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_4203 YP_006618287.1 Rhs element Vgr protein VFG2077 Protein 6e-119 44