|
Name : GEM_4589 (GEM_4589) Accession : YP_006618673.1 Strain : Genome accession: NC_018514 Putative virulence/resistance : Unknown Product : major facilitator superfamily transporter Function : - COG functional category : - COG ID : - EC number : - Position : 1561468 - 1562787 bp Length : 1320 bp Strand : + Note : - DNA sequence : ATGCAGACCCGATCCACCCTCGATGAGCATGCAGCCGTCGCGGCACCGGCGCCCGCCCGCACCGCGCAGCACTACCTGCT GGCCGGCTGGGCCAGCATGGCCGGCACGACGATCGAGTGGTACGACTTCTTCCTCTACGGCACCGCCGCCGCGCTCGTGT TCAACCGCATCTTCTTTCCGTCGCTCGATCCGGTCGTCGGCACGCTCGCCGCGTTCGGCACGTTCGCGGTCGGCTTCATC GGCCGGCCGATGGGCGGCATCGTGTTCGGCCACTTCGGCGACCGCATCGGCCGCAAGTCGATGCTGATGATCACGCTGCT GCTGATGGGCGTGCCGAGCATGATCATCGGGCTGATCCCGTCGTACGACCGCATCGGCTACTGGGCCGCCGCGCTGCTGA TCGCGATGCGCTTCCTGCAGGGGATGGCGGTCGGCGGCGAATGGGGCGGCGCGGTGCTGATGGCCGTCGAGCATGCGCCG AAGGGCCGCAAGGGGCTGTTCGGCAGCCTGCCGCAGACCGGCGTCGGGCTCGGGCTGATCCTGTCGTCGGTCGCGATGGC CGCGGTGGCCGCGCTGCCGGACGCCGACATGCTGTCGTGGGGCTGGCGCGTACCGTTCCTCGCGAGCATCGCGCTGGTCG GCCTCGGCTGGTTCATCCGCGCGAAGGTGCCCGAGTCGCCCGACTTCGAGAAGATGCAGCGCCAGGGCAAGGCCGAGAAG TCGCCGGTCACGGCCGCGCTGCGCCGCCATCCGCGCGAGGTACTGACGATCGTCGGCGCGCGCGCTGCCGAGAACACCTG GTTCTACATGGTCGTCACGTTCGCGCTCGCCTATGCGACGCAGCAGTTGCATCTGCCGAAGGCCGAGATGCTGCATGCGA TCACGGCCGGCGCGGCGCTGTCGCTCGTCACGATGCCGCTGTGCGGCCACCTGAGCGACCGCATCGGCCAGCGCCGGATG TTCGCGATCGGCCTCGTGCTGATGTGCGCGTTCGCCGCGCCGTTCTTCATGATGCTCGGCACGCAACAGACGTCGCTCGC ATGGTGGGCGATCGTGCTCGGCCTCGGCGTCGTGTTCCCGATTCTTTATGCCCCCGAGTCGCTGCTGTTCGCGCAGCAGT TCCCGGCGGAAATCCGCTACAGCGGCATCTCGCTGTCGGTGCAGCTCGCCGGCGTGATCGGCGGCGGCTTCGCGCCGATG ATCGCGACGTCGCTGCTCAAGGCCGGCGGCGGCCAGCCTCACTACGTGATCGCGTACCTCGTCGGCTTCGGCGTGTTCGC GCTCGTGTGTACCGCATTGATGCGGCCGGCACGCGCTTGA Protein sequence : MQTRSTLDEHAAVAAPAPARTAQHYLLAGWASMAGTTIEWYDFFLYGTAAALVFNRIFFPSLDPVVGTLAAFGTFAVGFI GRPMGGIVFGHFGDRIGRKSMLMITLLLMGVPSMIIGLIPSYDRIGYWAAALLIAMRFLQGMAVGGEWGGAVLMAVEHAP KGRKGLFGSLPQTGVGLGLILSSVAMAAVAALPDADMLSWGWRVPFLASIALVGLGWFIRAKVPESPDFEKMQRQGKAEK SPVTAALRRHPREVLTIVGARAAENTWFYMVVTFALAYATQQLHLPKAEMLHAITAGAALSLVTMPLCGHLSDRIGQRRM FAIGLVLMCAFAAPFFMMLGTQQTSLAWWAIVLGLGVVFPILYAPESLLFAQQFPAEIRYSGISLSVQLAGVIGGGFAPM IATSLLKAGGGQPHYVIAYLVGFGVFALVCTALMRPARA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 2e-71 | 43 |
