Gene Information

Name : Desmer_1601 (Desmer_1601)
Accession : YP_006621451.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1671980 - 1672312 bp
Length : 333 bp
Strand : +
Note : PFAM: BMC domain

DNA sequence : 
ATGGCTATAAGAGAAGATTTGGTAGCACTAGGAATGGTAGAAACCCGTGGAGTCGTAGGAGCTATTGAAGCGGCAGATGC
CATGGTCAAAGCAGCCAATGTCACCCTAATCGGGAAAGTAAAAGTTGGAGGCGCCTTAGTGACGGTCATGGTTCGAGGAG
ATGTGGGAGCGGTAAAAGCCTCCGTTGATGCGGGAGCAGCCGCTGCTGAGCGAGTCGGAGAGCTTATCAGTTGTCATGTT
ATACCCCGCCCACACCCTGAATTAGAAGCCATCCTGCCTAAATTACCGGTATTCGAAGAGAAACCTAAATCCAAAAACGT
TGAAAACAAATAA

Protein sequence : 
MAIREDLVALGMVETRGVVGAIEAADAMVKAANVTLIGKVKVGGALVTVMVRGDVGAVKASVDAGAAAAERVGELISCHV
IPRPHPELEAILPKLPVFEEKPKSKNVENK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 7e-10 60
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-09 57
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 5e-09 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_1601 YP_006621451.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 3e-10 60
Desmer_1601 YP_006621451.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 8e-10 57
Desmer_1601 YP_006621451.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 2e-09 57