Gene Information

Name : Desmer_1604 (Desmer_1604)
Accession : YP_006621454.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1674806 - 1675117 bp
Length : 312 bp
Strand : +
Note : PFAM: BMC domain

DNA sequence : 
ATGGCACAAGATCGAAGTGTAATAGCACTTGGCATGATAGAAACCAAAGGATTAATCCCAGCGATCGAAGCAGCCGACCA
AATGTTAAAAGCAGCCAATGTAGTACTCTGCGGCAAAGAACACGTCTCCGGCGGACTAGTCTCCGTCATGGTGCGAGGTG
ATGTCGGAGCGGTCAAAGCCGCCGTCGATGCAGGAGCCGCCGCCGCCCAGCGCGTGGGAGCACTCCTCAGCGTTCACGTC
ATTCCACGCCCCCATCACGATGTGGAATACATTCTGCCTGTCGGTGACAACAAAAGCTTTGGAGATAAATAA

Protein sequence : 
MAQDRSVIALGMIETKGLIPAIEAADQMLKAANVVLCGKEHVSGGLVSVMVRGDVGAVKAAVDAGAAAAQRVGALLSVHV
IPRPHHDVEYILPVGDNKSFGDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-07 63
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 6e-07 62
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-06 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_1604 YP_006621454.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 4e-08 63
Desmer_1604 YP_006621454.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 2e-07 62
Desmer_1604 YP_006621454.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 9e-07 58