Gene Information

Name : Desmer_4131 (Desmer_4131)
Accession : YP_006623831.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Virulence
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4305640 - 4306299 bp
Length : 660 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGCCTAATGTTATTGAATTAATCAATGTTAACAAGATCTTTGGAACCCGAGTAAAGACGCAAATTCTTTACGACATTAA
TTTAGAAATCAAGGAACACAGCATTAACTCGATTGTCGGGGCCTCCGGAAGCGGTAAAACGACCCTTCTAAATATTATGG
GTACTCTGGATAGGCCCACCAGTGGGGAAGTCATCATCGACGGATCTGATACTAAAACTATGGAGCAGCATAAGTTGGCT
AAGTTACGGAATCAGTCTATAGGGTTTATTTTTCAATTCCATTTTTTATTACAGGAGTTCAATGTTTTTGACAATGTTCT
CCTGCCTAGTGCAATACAAAGAAACAACGGATCTGAGATAAAGGAAAGGGCGAATCGCTTATTAGATATGTTAGGGCTAT
ATAAGTATCGCTGCTCCAATGTCCTTGATCTATCCGGGGGTCAACAGCAGCGTGTCGCCATTGCCAGGTCGCTGATTAAT
AACCCTAAGGTCATCCTGGCTGATGAGCCAACGGGAAACCTGGATTTACATAGTTCAGAAGATGTTTATGGCATTTTTAA
ACAAGTAAATAAAGAGTACGGTGTCGCTTTTGTCATTGTTACCCACGACAAACACCCCGCTGGCCGCGTCATTAAGATTC
AAGACAGGAAACTAGTTTGA

Protein sequence : 
MPNVIELINVNKIFGTRVKTQILYDINLEIKEHSINSIVGASGSGKTTLLNIMGTLDRPTSGEVIIDGSDTKTMEQHKLA
KLRNQSIGFIFQFHFLLQEFNVFDNVLLPSAIQRNNGSEIKERANRLLDMLGLYKYRCSNVLDLSGGQQQRVAIARSLIN
NPKVILADEPTGNLDLHSSEDVYGIFKQVNKEYGVAFVIVTHDKHPAGRVIKIQDRKLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_4131 YP_006623831.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 1e-29 44
Desmer_4131 YP_006623831.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 7e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_4131 YP_006623831.1 antimicrobial peptide ABC transporter ATPase VFG0869 Protein 6e-17 41