Gene Information

Name : Desmer_4270 (Desmer_4270)
Accession : YP_006623961.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4460611 - 4461333 bp
Length : 723 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
TTGATAACGCTAAAAGGAATCAAAAAGATCTATGCTAATGGGGATATTAAAGTTGCGGCCTTAGGCGGCGTGGATTTGCA
CGTAGGGGAAGGCGAATTCGTTTCCATCATGGGACCTTCCGGGTCGGGCAAGTCGACGATGATGAATATACTTGGCTGTT
TAGACACTCCCACTGAGGGTGAATACTACCTTGATGGAACTGATGTGGCAAAGGCCAGCGGTGATGAATTATCCGTAATT
CGCAATCGTAAGATCGGCTTTGTATTTCAAGGCTTTAATTTGCTCCCTCGAACCATGGCTGTTGAAAACGTAGAGCTCCC
CCTGCTTTATGCAGGAGTGGGTACTAAGGAAAGACGTACTCGCGCTGTTGCAGCGTTGGAATCCGTCGGCCTCGGCACAC
GAATTCATCACCGTCCTAAAGAACTATCCGGTGGACAACAGCAGCGGGTAGCTATTGCTCGAGCCCTTGTCACGAAGCCT
TCAATCATCTTAGCGGATGAGCCTACGGGGAACCTGGATAGTCGATCGAGTGAAGAGGTTATGGCCATTTTCCAGCGTCT
CCATGCCGAGGGAAATACTATTATCATAGTAACCCATGAACCGGATATTGCAGAGTTTACCCAGCGGATTGTTCGTTTTC
GAGACGGTCACATTGAAGGGGATGAGATCGTAGAAAATCCCCGCCAGGCACAAGTGCAAACCGAGGAGGGAAGAGCAGAG
TGA

Protein sequence : 
MITLKGIKKIYANGDIKVAALGGVDLHVGEGEFVSIMGPSGSGKSTMMNILGCLDTPTEGEYYLDGTDVAKASGDELSVI
RNRKIGFVFQGFNLLPRTMAVENVELPLLYAGVGTKERRTRAVAALESVGLGTRIHHRPKELSGGQQQRVAIARALVTKP
SIILADEPTGNLDSRSSEEVMAIFQRLHAEGNTIIIVTHEPDIAEFTQRIVRFRDGHIEGDEIVENPRQAQVQTEEGRAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_4270 YP_006623961.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 4e-60 57
Desmer_4270 YP_006623961.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 1e-48 51
Desmer_4270 YP_006623961.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 7e-40 45
Desmer_4270 YP_006623961.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 2e-40 44