Gene Information

Name : Desmer_4376 (Desmer_4376)
Accession : YP_006624059.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4591907 - 4592194 bp
Length : 288 bp
Strand : -
Note : PFAM: BMC domain

DNA sequence : 
ATGAATAAATCAGACGCTTTAGGATTAATCGAAACCAGAGGTATGGTAGGAGCAATTGAAGCAGCAGATGCTATGGTTAA
AGCAGCCAATGTTACGCTGATGGGTTATGAAAAAGTCGGTGGTGCTTTGGTAACTGTTATGGTAAGAGGAGATGTTGGGG
CTGTAAAAGCTGCAACTGATGCCGGTGCTGCTGCCGCTCAACGTGTTGGAGAATTAATCTCAGTTCATGTTATTCCACGT
CCACACGGTGACGTAGAGATGATGCTTCCCGGTGGTAAAAAAGCTTAA

Protein sequence : 
MNKSDALGLIETRGMVGAIEAADAMVKAANVTLMGYEKVGGALVTVMVRGDVGAVKAATDAGAAAAQRVGELISVHVIPR
PHGDVEMMLPGGKKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-16 65
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-16 64
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-15 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_4376 YP_006624059.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 8e-17 65
Desmer_4376 YP_006624059.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 1e-16 64
Desmer_4376 YP_006624059.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 1e-15 60