Gene Information

Name : Desmer_4378 (Desmer_4378)
Accession : YP_006624061.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Virulence
Product : acetaldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.10
Position : 4592859 - 4594343 bp
Length : 1485 bp
Strand : -
Note : PFAM: Aldehyde dehydrogenase family; TIGRFAM: acetaldehyde dehydrogenase (acetylating)

DNA sequence :
TTGGAAAACTTTGATTATGATTTACAATCCGTACAAGAGACCAGAAATATTGCTCGTCAAGCTAAACTAGCTCAAAGTGA
GCTGGCAAAATTTAATGCTGAGCAGATTGATAAAATCATCCGGAATATGGTCAAAGTAGCTGAAGAGAATGCAATTTCAC
TGGCAAAAATGGCAGTAGAGGAGACCGGCTTTGGTAAAGTAGAGGATAAGATCTTTAAAAATCGTTTTGCTTCTACAGAA
CTCTACGAATTCATCAAACCCATGCAAACCATTGGAGTCATCAAAGATGATAAGGTCAATAAACTTATCGAAATTGCTGA
ACCGGTAGGACTACTGATGGGAATTATCCCATCAACGAATCCCACATCTACGACTATCTATAAATCGATTATTGCAATTA
AGTCCCGCAACGGGATTGTATTCTCCCCCCATCCTTCGGCTCTGAAATGCACCCTCCAAGCTGCAAGACTAATGAATGAT
GCAGCCGTCGCTGCAGGTGCTCCGGCCAATATTATTGGATGCATCTCTAAACCCTCCATGGGTGCTACCAATGAGCTGAT
GAAATGTGATGAAGTGGCCTTGATAATTGCGACAGGTGGCTCAGCCATGGTTAAGGCAGCTTATAGCGCGGGAAAACCAG
CATTGGGTGTAGGCCCAGGCAACGTTCCTGCTTATATTGAGAGAACAGCAGATATCCCGAAAGCAGTCAAAAATATCATA
GCCAGTAAAACCTTTGACAATGGAACTATCTGCGCTTCTGAGCAATCGGTTATTGTTGAAGAATGCCTTCGTGACCAGGT
CATGGAAGAGTTCAAACGTCAGGGCGGCTACTTCATGACACCTGAGGAAACAAGTAAAGTTGCCAAAAACCTATTTACTC
GCAATCATGCCATGAACGCCAAAATGGTAGGAAGATCCGCGGCTGTTATTGCAGAAGGTGCCGGCATTACAGTTCCTTTG
GGAACAAAGGTTTTGCTAGGAGAACAACACGGTGTTGGTGAACAATACCCCTTATCCTACGAGAAATTAACCACCGTATT
GGCATTTTATACCGTAAAAGACTGGGAAGAAGCTTGTGATCTGTGCATTAAACTCTTGAATAACGGTGGTGTCGGACACA
GCCTTTCCATTCATACTCAAAATCCTGAAATGGCTCTTAAATTTGCCGAAAAACCTGTCTTCAGGATCTTGGTCAATACA
GCCTCCAGTCAGGGCGGCGTAGGTGCAAGTACAGGTCTTTCACCATCCTTTACACTGGGTTGCGGTACTTGGGGCGGAAG
TGCAACCTCCGATAATGTAACCCCCATGCACTTAATCAATATTAAACGTGTTGCCTATGGAATCAAAGATGTTACCGAAA
ATCAACCCCCCGCCTATTCAGCTTGCGAAGCTCAAAGCGGCATGCCTGGCGCTATCAGTGACGATCAGATCATGAGCGTT
GTGAATGAAGTCATTTCTCTGCTGAAAAAAAGAGGTGATAACTAA

Protein sequence :
MENFDYDLQSVQETRNIARQAKLAQSELAKFNAEQIDKIIRNMVKVAEENAISLAKMAVEETGFGKVEDKIFKNRFASTE
LYEFIKPMQTIGVIKDDKVNKLIEIAEPVGLLMGIIPSTNPTSTTIYKSIIAIKSRNGIVFSPHPSALKCTLQAARLMND
AAVAAGAPANIIGCISKPSMGATNELMKCDEVALIIATGGSAMVKAAYSAGKPALGVGPGNVPAYIERTADIPKAVKNII
ASKTFDNGTICASEQSVIVEECLRDQVMEEFKRQGGYFMTPEETSKVAKNLFTRNHAMNAKMVGRSAAVIAEGAGITVPL
GTKVLLGEQHGVGEQYPLSYEKLTTVLAFYTVKDWEEACDLCIKLLNNGGVGHSLSIHTQNPEMALKFAEKPVFRILVNT
ASSQGGVGASTGLSPSFTLGCGTWGGSATSDNVTPMHLINIKRVAYGIKDVTENQPPAYSACEAQSGMPGAISDDQIMSV
VNEVISLLKKRGDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42076.1 hypothetical protein Not tested PAI II 536 Protein 4e-99 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_4378 YP_006624061.1 acetaldehyde dehydrogenase VFG1595 Protein 2e-99 49