Gene Information

Name : Desmer_4388 (Desmer_4388)
Accession : YP_006624071.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Virulence
Product : glycyl-radical enzyme activator family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4600050 - 4601060 bp
Length : 1011 bp
Strand : -
Note : PFAM: Radical SAM superfamily; TIGRFAM: glycyl-radical enzyme activating protein family

DNA sequence :
ATGGAGAATACTAGGGATGGGGACATTATGAGTACAGAAACCGTTAAAATCTTGGAAAGAAAAGCGAAAATCTTCAATGT
CCAGAAATACTCCATTTATGATGGGCCGGGGGTTAGAACATTAATTTTTTTCAAAGGCTGTCCCCTCAGATGTAAATGGT
GCTCAAATCCTGAGGGGCTTGAAAGAAAGTATCAAGTCATGTTCAAAGAGGATCTTTGCATTGATTGTGGCCTCTGTATT
ACTGAATGTCCCGTCCAAATCCATTATTTCCAGGACGAAGGAGAGAAGCTGCGACAACCTAAACCTAAAACAACTAGGCA
TAGAGTAAATCGGAGCATTGACTGTATCGGTTGCCGAAAATGCGAAACTGTCTGTCCTAAACAGGCACTCTCCATTGTCG
GTTCAGACAAAACAATTTCTGAAGTTCTGGAGATCATCCAGCAAGACATGCTCTTCTACCTGAGTTCAGGTGGAGGAGTG
ACTCTTGGGGGAGGGGAAGTCACAGCTCAGCCGGAATTTGCCACCAACCTCCTAACCGAGTGCAAGCGTTTAGGTATTCA
CACTGCCATTGAAACCTCAGGCTATGTGAAACTGGATTCCCTGCTCATGATAGCCCAGTTTACGGATTTGTTTCTCTATG
ATATTAAGCACATTGATTCTGATCGGCATCATGAACTTACCGGAGTACGTAATGAACGTATCCTGGACAACCTAAGAGAG
CTCGTACGCCGAGGTTTTAATGTTAAAGTCAGGATGCCTCTCCTTAAGGGATTAAATGATAGTGAAGAAACTATCGTCAA
AACCTTGGAGTATCTAAAGCCCTTTAAAAACTATAGGAACTTTCAGGGTGTTGACTTGCTCCCCTATCACAAATTAGGGA
TCAACAAATACAAGCAATTAGACATGAGTTACTCGATCACCGAAGATTTAAGCTACAAACCGGAAGAATTAGATAAAATC
GAAGAGTTAATCAAAGGGTATGACTTTCAGGTGGAAGTTATAAGACATTAA

Protein sequence :
MENTRDGDIMSTETVKILERKAKIFNVQKYSIYDGPGVRTLIFFKGCPLRCKWCSNPEGLERKYQVMFKEDLCIDCGLCI
TECPVQIHYFQDEGEKLRQPKPKTTRHRVNRSIDCIGCRKCETVCPKQALSIVGSDKTISEVLEIIQQDMLFYLSSGGGV
TLGGGEVTAQPEFATNLLTECKRLGIHTAIETSGYVKLDSLLMIAQFTDLFLYDIKHIDSDRHHELTGVRNERILDNLRE
LVRRGFNVKVRMPLLKGLNDSEETIVKTLEYLKPFKNYRNFQGVDLLPYHKLGINKYKQLDMSYSITEDLSYKPEELDKI
EELIKGYDFQVEVIRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42072.1 hypothetical protein Not tested PAI II 536 Protein 9e-73 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_4388 YP_006624071.1 glycyl-radical enzyme activator family protein VFG1591 Protein 5e-73 52