Gene Information

Name : Desmer_4390 (Desmer_4390)
Accession : YP_006624073.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Virulence
Product : acetaldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4603686 - 4605167 bp
Length : 1482 bp
Strand : -
Note : PFAM: Aldehyde dehydrogenase family; TIGRFAM: acetaldehyde dehydrogenase (acetylating)

DNA sequence :
ATGAATAGAATAGACAACGATTTGCTCTCCGTCCAAGAGGCTCGAATTCTTGTGGAAAATGCCCGTGAGGCTCAAGAGAT
ACTGGCAACCTTCTCTCAGGAAATGTTGGACAAAATTGTCGGACATATGGCTGAAACGGTATATAAATATGCCAGAGAAC
TGGCAGTTCTGTCTCAGGAAGAAACAGGCTTTGGCAAGTGGCCGGACAAGCTAGTTAAAAATATTTTTGCCAGTGATTTT
CTCTACAAGAAGATCAGGGATATGAAAGTTGTCGGTATTATCAGTGAAGACAAAGAAAATAAGACTATAGATATAGGCGT
ACCTGTTGGAGTTATTGCTGCCTTGCCACCTTCTACCAACCCTGCCTCAACCACAATATATAAAACCCTGATTGCCATAA
AATCCGGCAATGCAATTGTTTTTGCACCTCATCCGAAAGCCAAAAAAACCATTACGAAGGTGCTTGATATATTAATTCGA
GCCGCAGAGGAAAAAGGCTTGCCAAGTGGTGCCATTGGCTATCTGCGAACCATTGCTGTGGACGGAACAGTTGCTTTAAT
GAACCACAAAGACACATCGCTTATCTTAATTACGGGTGTGCCCAAGATGGTCAAGGCCGCATATACATCCGGAAAGCCAA
CGATTTATGGCGGGCCGGGCAATGGACCTGCGTTTATTGAACGTTCCGCAGATATAAGAAAGGCTGTAGCAGATATTGTC
AGCAGCAGAACCTTTGATAACGGAATTGTCTCAGCATCGGAACAATCTATTGTAGCCGAAGACTGTATTGCCGATGAAGT
AAGGCGTGAACTCAAGAAAATTGGCGCATACTTTATGACTGGACAGGAGGCAGAACAACTTAGTAAGCTGTTTTTTCGGC
CTGATGACAGTTTGAATCCGGAGATTGTAGGAAAGACCGCTGTTGAGTTAGCTGGTCATATCGGTATCTGTGTTCCGGAA
GATACCAAAGTGTTAGTTTCGGAACAAAAATTTGTTTCATCCGCTAATCCTTATTCAAGAGAAAAGCTTTGCCCGGTTCT
GGCATTTTATGTAGAAAAAGATTGGATCAACGCTTGTGAAAAATGCATTGAATTGCTGGTCAATGAGGGGCGGGGACATA
CTCTGATTATTCATTCAAAAAATGAAGAAGTAGTTCGTGAGTTTGCCTTAAAAAAACCGGTATCAAGAGTGCTTGTAAAT
ACTCCTGCCACCTTAGGCGGGATAGGAGCGACAACTAATCTCTTCCCGGCCTTAACCTTGGGTTCCGGAGCAGCAGGCGG
TGGGTTCACTTCCGATAATGTAAGCCCAATGAACTTAATTAACATTCGAAAAGTCGGTTATGGCGTTCGACAGCTAGAGG
ATATAACCAATGGCACACAGGTGGGGAAAGACGCTAAAGTAAGTAAGACTAGTAGTTTGTCTGATCAGAGTTCCACTGAT
CTGGTTGAGCTGCTTGAAAAATTACTAAAACAACTCACCTAA

Protein sequence :
MNRIDNDLLSVQEARILVENAREAQEILATFSQEMLDKIVGHMAETVYKYARELAVLSQEETGFGKWPDKLVKNIFASDF
LYKKIRDMKVVGIISEDKENKTIDIGVPVGVIAALPPSTNPASTTIYKTLIAIKSGNAIVFAPHPKAKKTITKVLDILIR
AAEEKGLPSGAIGYLRTIAVDGTVALMNHKDTSLILITGVPKMVKAAYTSGKPTIYGGPGNGPAFIERSADIRKAVADIV
SSRTFDNGIVSASEQSIVAEDCIADEVRRELKKIGAYFMTGQEAEQLSKLFFRPDDSLNPEIVGKTAVELAGHIGICVPE
DTKVLVSEQKFVSSANPYSREKLCPVLAFYVEKDWINACEKCIELLVNEGRGHTLIIHSKNEEVVREFALKKPVSRVLVN
TPATLGGIGATTNLFPALTLGSGAAGGGFTSDNVSPMNLINIRKVGYGVRQLEDITNGTQVGKDAKVSKTSSLSDQSSTD
LVELLEKLLKQLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42076.1 hypothetical protein Not tested PAI II 536 Protein 5e-119 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_4390 YP_006624073.1 acetaldehyde dehydrogenase VFG1595 Protein 3e-119 59