Gene Information

Name : Desmer_4392 (Desmer_4392)
Accession : YP_006624075.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4605540 - 4605839 bp
Length : 300 bp
Strand : -
Note : PFAM: BMC domain

DNA sequence : 
ATGAAATACTTTGGGGAAGAAGCACTTGGTCTTGTGGAAACGAGAGGTATGGTGCCGGCAATTCAAGCAGCAGATGTTAT
GTGTAAAGCAGCTGATGTTGTTCTTGTTTCTTATGAAAATGTTGGTTCGGGACTTGTTACAGTGATGGTTAAAGGGAGCG
TAGCCGCAGTGAGATCAGCTGTAGAAAGTGGTGCAGCGGCAGCAGCAGCCATAGGCGAAGTGACAGCCTCCCATGTGATG
CCACGTCCCGTCAGTCGGGTAGGTAAGATTGTTTCGGTTCATGACATTGATGAAGAGTGA

Protein sequence : 
MKYFGEEALGLVETRGMVPAIQAADVMCKAADVVLVSYENVGSGLVTVMVKGSVAAVRSAVESGAAAAAAIGEVTASHVM
PRPVSRVGKIVSVHDIDEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-12 63
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 6e-12 59
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-11 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_4392 YP_006624075.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 6e-13 63
Desmer_4392 YP_006624075.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 3e-12 59
Desmer_4392 YP_006624075.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 6e-12 58