Gene Information

Name : Desmer_4530 (Desmer_4530)
Accession : YP_006624206.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4744431 - 4745261 bp
Length : 831 bp
Strand : -
Note : PFAM: Transketolase, thiamine diphosphate binding domain

DNA sequence : 
ATGACCGCACTTGAACTAAAGCGAGTCGCGAATGTTATTCGTCAAGATATAATATCCATGCTTGCTGCTGCTAAATCGGG
TCATCCGGGTGGCAGCTTATCTGCTGCCGATATTGTAGCCACATTATTCTTTAACGAAATGCGGCTTAATCCAAATGATC
CCCACTGGGAGGATCGAGATCGTTTTGTCCTTTCCAAAGGACATGCAGCTCCGGTACTTTATTCAGCCCTAGCGGAAAAG
GGGTATTTTCCCAAGGAGGAATTGCAGGGACTTCGCCAAACGGGACATATGCTGCAAGGACATCCAGACATGAAGAAGAC
TCCTGGGGTAGATATGTCCACAGGTTCTTTGGGGCAAGGGCTATCCGCTGCTAATGGAATGGCCTTAGCAGGTAAATTAG
ATGGAAAAGACTATCGCGTGTATACAGTATTAGGCGATGGCGAAATGGCTGAAGGACAAATCTGGGAAGCAGCTATGGCT
GCCGCACACTACAAGCTGGATAACCTAACAGCTATTTTGGACTATAATGGTCTGCAAATCGACGGCAAGACGGACAGTGT
TATGTGTTCGGCTCCCCTGGCCCAGAAGTGGCAGGCATTTTGTTGGCATGTAATTGAAGTCGACGGGCACGATATTGATG
CTTTGCTCGCCGGATTTGCTGAGGCCAAGCAAGTTAAAGGCAGACCAACAATGATTATTGCCAAGACTGTGAAGGGCAAA
GGGGTTTCTTTCATGGAAGATCAAGCTGGCTGGCATGGCAACGCACCTTCCCTTGAACAAGCTGAGCAGGCTCTTAAAGA
ACTTCGAGAGGAGGCGAAAAACCTTGGCTAG

Protein sequence : 
MTALELKRVANVIRQDIISMLAAAKSGHPGGSLSAADIVATLFFNEMRLNPNDPHWEDRDRFVLSKGHAAPVLYSALAEK
GYFPKEELQGLRQTGHMLQGHPDMKKTPGVDMSTGSLGQGLSAANGMALAGKLDGKDYRVYTVLGDGEMAEGQIWEAAMA
AAHYKLDNLTAILDYNGLQIDGKTDSVMCSAPLAQKWQAFCWHVIEVDGHDIDALLAGFAEAKQVKGRPTMIIAKTVKGK
GVSFMEDQAGWHGNAPSLEQAEQALKELREEAKNLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96117.1 transketolase Not tested T-PAI Protein 5e-41 43
unnamed AAT96056.1 transketolase Not tested T-PAI Protein 2e-41 43
unnamed AAT96177.1 transketolase Not tested T-PAI Protein 1e-40 43
unnamed AAT96100.1 transketolase Not tested T-PAI Protein 7e-41 43
unnamed AAT96229.1 transketolase Not tested T-PAI Protein 5e-41 43