Gene Information

Name : Desmer_0640 (Desmer_0640)
Accession : YP_006620544.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 657464 - 658138 bp
Length : 675 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGTCTTTAATTAAAGTGTGTGAGGTTAGCAAATCCTATGGCGATGGAGACAAACTCGTCGAAGCCTTAAGCAATATCAA
TCTAGAGATTAACCAAGGGGAATTTTTAGCTTTGATGGGCCCTTCAGGTTCCGGCAAAAGCACGCTATTAAGTATTATAG
GAGGATTGACCCCCCCGACCTCCGGCACACTCCTGATCGATGATATTGATGTCTATGCCTTAGACTCGGAACGATTAGCA
GATTTCCGTCATGAATACGTGGGATTCGTTTTTCAGCAATATCAATTAATTCCTTACCTGACTGCCTTAGAGAATGTAAT
GCTCCCGCTGGCCATAACCTCCCGCCCCGGAAAAGAACAACGTGAGATGGCCTTAGAAGTTTTAGACAAAGTTGGTCTTC
GCTCCAAATCCCTTCGTCTCCCCAGTCAATTATCCGGCGGGGAGCAAAACCGAGTGGCCATTGCTCGAGCCATTGTCAAT
CGTCCGGCAATTATTTTTGCAGATGAACCCACTGGAAGTTTGGACTCAAAAACAGCAAAAGAACTTTTAGAATTGTTCCA
AGCCCTGAACAAGGATGGTCTAACTATTATTATGGTAACTCATAATGAAGAAAACCTAGCCTGGGTCTCCCGCGCTATTT
ATATCCGTGACGGATTTTTGGCTCAAATCCCATAA

Protein sequence : 
MSLIKVCEVSKSYGDGDKLVEALSNINLEINQGEFLALMGPSGSGKSTLLSIIGGLTPPTSGTLLIDDIDVYALDSERLA
DFRHEYVGFVFQQYQLIPYLTALENVMLPLAITSRPGKEQREMALEVLDKVGLRSKSLRLPSQLSGGEQNRVAIARAIVN
RPAIIFADEPTGSLDSKTAKELLELFQALNKDGLTIIMVTHNEENLAWVSRAIYIRDGFLAQIP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_0640 YP_006620544.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 7e-48 52
Desmer_0640 YP_006620544.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 2e-39 42
Desmer_0640 YP_006620544.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 4e-39 42
Desmer_0640 YP_006620544.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 4e-36 42