Gene Information

Name : B005_4934 (B005_4934)
Accession : YP_006643992.1
Strain : Nocardiopsis alba ATCC BAA-2165
Genome accession: NC_018524
Putative virulence/resistance : Resistance
Product : ABC transporter family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5123636 - 5124343 bp
Length : 708 bp
Strand : -
Note : -

DNA sequence :
ATGACCATCACGGCCGCGTCCAACGCGGAATCCACCGACGAGAACACCGAAGGACTCCTTCTCGAAGGCGTCACCCTGCG
CCTGGGCGATGGGGACGCCACGGTCACGGCCCTGGACGACGTCTCCATCTCCGTCCGTCCCGGAGAGCTGGTCGCGGTGG
TCGGCCCCTCGGGCGCCGGCAAGTCCAGTCTGCTCGCCGTCGCCGGCGCACTGACAGTGCCCGACTCCGGCGTCGTCCGT
GCCGGTGGACGGGACATCACCGGTCTCTCCCGGCGCGCCCGGGCACGTTTCCGTCGGGACCACATCGGCTTCGTGTTCCA
GTCGGGCAACCTGCTCGGCGCTCTCACCGCCACCGATCAACTGCGCATGATGACCCATCTGGGGCGAGGGGGCCGCAGGC
ACGATCCTCAGCGGCTCCTGGAGGAGGTCGGTATGGCCGACAAGGCGGACCGGAGACCGCACCAACTCTCCGGAGGAGAG
CGTCAGCGGGTCGGGATCGCCCGTGCCCTGATGGGCGAACCCACGGTCCTGCTCGTGGACGAACCGACGGCGGCGCTGGA
CCGGGCCCGCAGTCACGAGATCGTCCGGCTGCTCGCGCGGGAGACTCGACGTTCCGATGTGGCTACGATGATGGTCACCC
ACGACCACGACGTTCTGGAGTACTGCGACCGGACGGTCCAGATGACGGACGGTCGCCTATCGGAATGA

Protein sequence :
MTITAASNAESTDENTEGLLLEGVTLRLGDGDATVTALDDVSISVRPGELVAVVGPSGAGKSSLLAVAGALTVPDSGVVR
AGGRDITGLSRRARARFRRDHIGFVFQSGNLLGALTATDQLRMMTHLGRGGRRHDPQRLLEEVGMADKADRRPHQLSGGE
RQRVGIARALMGEPTVLLVDEPTAALDRARSHEIVRLLARETRRSDVATMMVTHDHDVLEYCDRTVQMTDGRLSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B005_4934 YP_006643992.1 ABC transporter family protein NC_008702.1.4606598. Protein 1e-28 45