Gene Information

Name : PCC21_010060 (PCC21_010060)
Accession : YP_006645662.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Virulence
Product : iron-dicitrate transporter substrate-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1132997 - 1133911 bp
Length : 915 bp
Strand : -
Note : -

DNA sequence :
ATGTCTGCTCTAATTCGCGTTGCACTGATTACCACGCTTTGCCTGTTCGGACTGGGCCGCGCCAATGCGGTAACCGTGCA
GGATGAACAAGGTTCCTTTACGCTCGACACGCCGCCTCAGCGTATTGTGGTGCTGGAACTGTCTTTTGCCGATGCGCTGG
CAGCAATAGATGTCAGCCCGGTCGGCATCGCCGATGACAACGATCCAGACCGGATCCTGACAGAAGTCCGCGAACACCTT
AACCCCTGGCATTCCGTAGGCACGCGCGCACAGCCGAGCCTGGAAGCCATCAGCGCATTGAAGCCGGATTTGATTATCGC
CGACAGCAGCCGCCATAGCGGCATTTACACGGCGCTGAAAGCGATTGCACCAGTGCTGCTGCTGAAGTCGCGCAACGAAA
CCTATGAAGAGAACCTGCACTCAGCGGAGATCATCGGCAAGGTGTTGGGGAAAGACAGCGTGATGCAGGCTCGTCTGGCC
CAGCATCGCGAGACGATGAAGGCCTACGCCGCCCAGCTTCCCCAAGGCACAAATGTGGTCTTCGGCACCTCACGCGAGCA
GCAGTTTAACCTGTACTCCAGCGATGCCTACACCGGCAGCGTGCTGGCCGCACTTGGCCTGAACGTCCCGAAACCCATTA
ACAATGCGCCGATGGCTTCCATCAATCTGGAACAGCTGCTGGCGATTAACCCACAGTGGCTGATCGTGACGCACTATCGC
GAAGAAAGTATTGTGAAACGTTGGCAGCAGGATACGCTCTGGAACCTGCTGGAAGCGCAGCAAAAACAGCAGATTGCCGC
CGTTGACAGCAATGCCTGGGCGCGGATGCGCGGTATTTTTGCCGCGGAACGCATCGGCAGCGATACGGTGAAAATTTTTA
AGCACCAGCCCGTTAGCGTCAGCAGCGAGCAATGA

Protein sequence :
MSALIRVALITTLCLFGLGRANAVTVQDEQGSFTLDTPPQRIVVLELSFADALAAIDVSPVGIADDNDPDRILTEVREHL
NPWHSVGTRAQPSLEAISALKPDLIIADSSRHSGIYTALKAIAPVLLLKSRNETYEENLHSAEIIGKVLGKDSVMQARLA
QHRETMKAYAAQLPQGTNVVFGTSREQQFNLYSSDAYTGSVLAALGLNVPKPINNAPMASINLEQLLAINPQWLIVTHYR
EESIVKRWQQDTLWNLLEAQQKQQIAAVDSNAWARMRGIFAAERIGSDTVKIFKHQPVSVSSEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecB AAL08454.1 FecB Virulence SRL Protein 4e-103 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_010060 YP_006645662.1 iron-dicitrate transporter substrate-binding subunit VFG1045 Protein 2e-103 71