Gene Information

Name : PCC21_010080 (PCC21_010080)
Accession : YP_006645664.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Virulence
Product : fec operon regulator FecR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1136442 - 1137398 bp
Length : 957 bp
Strand : -
Note : -

DNA sequence :
GTGAGCCTGACGCTAACCGATTCCCAGCGTCAGGCCTTGCGCTCCGCCTCGCATTGGTATGCGGTACTGAGCGACGAACG
CGTGAGCCCCCAGCAAACTGAGAAATGGCAGCAGTGGTATGCGCAAAATCGGGATCACCAGTGGGCCTGGTCGCAGGTAG
AAAATCTGCGCAGCCAGATGAACGTCGTGCCTGGCAACGTCGCTCACCGCGCCCTTCAGGATACGCAGCTTACTCGCCGC
CGAGTGATGAAAAGTCTTTTACTGCTGTTAGGCGTTGGTGGCGGGTGGCAGCTTTGGCGTTCCGACACCGGAACGGGCCT
TCGCGCCGATTACACCACGGCGAAAGGGGCAATCCGTCAGCAGCGTCTGGAAGACGGAACGTTGCTTTCGCTGAACACCG
ACAGCGCCGTCGATGTTCGCTTCGATCCACAGCAGCGGCGTATTCACCTCTGGTACGGCGAAATCGCGATTACCACCGGA
CAGGATGCCAGCAGCCGCCCTTTCTACGTGCAAACGCGACACGGGCAATTGACCGCACTCGGCACTGAATTTACGGTCCG
TCAGGAATCCGACAGCACGCTACTGAGCGTGCAACATCATGCGGTGAAAGTCGTACTGGCCGACGATCCGGCCCAAGAGC
GCATCGTGCGTCAGGGCGAAAGCCTGCGCTTCAGCGCGCGGGCTCTGGATGAAATCCAATCCGCAGAGGAAGAAGACAGC
AACTGGGCGCAGGGCATTCTCAGTTTCAGCAATAAGCCGCTCGGCGATGTGATAGCGACGCTATCGCGCTATCGTCACGG
CGTACTGCGCTGTAGCCCAGAGGTCGCGACGCTGCGGTTAAGCGGCACCTTCCCGCTGAAAAATACCGATACGGTGTTAC
AGATCATCGAGAAAACACTTCCTGTTAAAATTCAATACATTACTCGTTACTGGGTCAATATCCTTCCCGTAAGCTAA

Protein sequence :
MSLTLTDSQRQALRSASHWYAVLSDERVSPQQTEKWQQWYAQNRDHQWAWSQVENLRSQMNVVPGNVAHRALQDTQLTRR
RVMKSLLLLLGVGGGWQLWRSDTGTGLRADYTTAKGAIRQQRLEDGTLLSLNTDSAVDVRFDPQQRRIHLWYGEIAITTG
QDASSRPFYVQTRHGQLTALGTEFTVRQESDSTLLSVQHHAVKVVLADDPAQERIVRQGESLRFSARALDEIQSAEEEDS
NWAQGILSFSNKPLGDVIATLSRYRHGVLRCSPEVATLRLSGTFPLKNTDTVLQIIEKTLPVKIQYITRYWVNILPVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecR AAL08457.1 FecR Virulence SRL Protein 4e-104 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_010080 YP_006645664.1 fec operon regulator FecR VFG1048 Protein 2e-104 70